Acetobacter oryzoeni: EOV40_000845
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Entry
EOV40_000845 CDS
T06445
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aoy
Acetobacter oryzoeni
Brite
KEGG Orthology (KO) [BR:
aoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoy03016
]
EOV40_000845 (rnd)
Enzymes [BR:
aoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EOV40_000845 (rnd)
Transfer RNA biogenesis [BR:
aoy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EOV40_000845 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Trp_repressor
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QEE84364
UniProt:
A0A5B9GGR7
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All DBs
Position
173325..174533
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AA seq
402 aa
AA seq
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MARSATPAFPPARLISSTQELEAALAPFHNESFVTVDTEFMREQTYWPELCLVQIGAVHD
VVLIDALAEGIDLTPLKNLFADTAVLKVFHAARQDLEIFLHLFDALPTPLFDTQVAAMVA
GFGDQVGYDSLVGSLTGHMIDKSHRFTDWSVRPLSPAQLTYAAGDVTWLRLVYERLVKKL
EQEKRLDWVAAEMAELEDPATFRPDPEKQWERLRARTNNRRMLAVLRAIAALREREAQRV
NVPRQRLVKDESLLEIAATTPATTEALTRVRGVSRGLAEGRTGQALLQAIKQAQALPDSE
LPRSPRSKSKDTPRPSASLVALLKVLLTSCCEKHDVAPRLVASADDLDALALDPSQPHAV
LAGWRRKVFGETAQALCEGKIALCVKSGRVVAIPQNTDVSSV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcagcaacccctgcattccctcccgcgcgccttatttcctctactcaggag
ttagaggcggctcttgcaccctttcataatgaaagcttcgtaacggttgatacggagttt
atgcgggagcaaacatactggcccgaactctgtctggttcagattggtgcggttcatgat
gtcgtgctgatagatgcgctggctgaaggtattgatctgaccccgctgaaaaatctcttt
gcagatacggcagtgctgaaggtgtttcacgcagcccggcaagatctggaaatttttctg
cacctgtttgatgccttgccgactccgctttttgatacgcaagttgccgcgatggttgct
gggtttggagatcaggttgggtatgacagtctggttggttccttaaccggacatatgatt
gataaaagccaccgctttacagattggtctgtgcggccattgtccccggcccagctgaca
tatgctgcgggcgatgtaacgtggttgcggctggtttatgagcggcttgttaaaaaactg
gagcaggaaaagcgtttggattgggttgcggctgaaatggccgagctagaagaccctgcc
acatttcgcccagacccggaaaaacagtgggagcgtttacgtgcacgcaccaataaccgg
cgtatgctggcagtgttgcgtgccattgctgccttgcgtgagcgtgaagcccagcgcgtg
aatgttccgcgtcaacgactggtgaaagacgaaagcctgctggaaattgcagcaacgacg
ccagcaacaactgaagctttaacgcgtgttcgcggtgtttctcgtgggttggcagaaggg
cgtacgggccaagctttgttgcaggctatcaagcaggcacaggctttgccagactcggaa
cttccgcgttctccacgcagcaagagcaaagatacaccaaggccgtcagcatcgttggtg
gcattgttgaaggtgcttttaacatcttgctgtgaaaagcacgatgtcgctccgcgcttg
gtggcatctgcagatgatctggatgctttggcgcttgatccttctcagcctcatgctgtg
ctggcggggtggcggcgcaaggtgtttggtgaaacagctcaggctttgtgtgagggaaaa
attgccctctgcgtaaagtctggtcgcgttgtggctattccacaaaatacggatgtgtct
tccgtttaa
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