Isoalcanivorax pacificus: S7S_04790
Help
Entry
S7S_04790 CDS
T03580
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
apac
Isoalcanivorax pacificus
Pathway
apac00300
Lysine biosynthesis
apac00550
Peptidoglycan biosynthesis
apac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
S7S_04790
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
S7S_04790
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apac01011
]
S7S_04790
Enzymes [BR:
apac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
S7S_04790
Peptidoglycan biosynthesis and degradation proteins [BR:
apac01011
]
Precursor biosynthesis
Amino acid ligase
S7S_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AJD47380
UniProt:
A0A0B4XL13
LinkDB
All DBs
Position
1017456..1018946
Genome browser
AA seq
496 aa
AA seq
DB search
MSLALSQLLPDMPLPASLAATPISALCLDSRRISAGDTFVALAGHQQDGRIYIEQAIAGG
ATLVLAEADETRVVMQQGVPVIGITALRQQLGVIAARLFGEPGRAMTVTGITGTNGKTST
SWFLCDALNAVGRACALVGTLGLRFAGALEDVGHTTPDPITLQRALARFRDEGAQAVVME
VSSHALDQGRLNGTPVSVAVFTNLSRDHLDYHGDMEQYLAAKAKLFEGADLSLAVINLDD
PAGVRLRERLPARLPCITFGDHADAVVRCERLQAGADGIRFVLNVAGTNVTASVPLYGRF
NLDNLMAVAAVLHGLGYDADALERAFAAVTPVPGRMQPVTLAGTPAPVVLVDYAHTPDGL
DKALRAARVHFAGRLHCVVGCGGNRDRGKRPEMAAVAEQLADVVVLTSDNPRFESPQAIL
ADMRAGLAQPERARIIVRRDDAIAEAIGQAGDNDVVLIAGKGHETYQEIQGQRYPMDDRA
LALAALQARRAGGEGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggccctgagtcagctgctgcccgacatgcccctgccggcgtcgctggcggcg
acgccgatttccgcactgtgtctggacagccggcgcatcagcgccggcgatacgtttgtg
gcgctcgcggggcatcagcaggacggccgcatctatatcgagcaggccattgccggcggc
gcgacgctggtgctggcggaagcggacgaaacccgcgttgtcatgcagcagggcgtgccg
gtgatcggcatcactgcgctgcgccagcaactgggtgtgattgccgcgcggctgttcggt
gaaccgggcagggcgatgacggttaccggcattaccggcaccaatggcaagaccagcacc
agctggttcctgtgtgatgcgctcaatgcggtgggccgcgcctgtgcgctggtcggtacg
ctcgggctgcggtttgccggggcgctggaggatgtgggccacaccacgccggatccgatc
acgctgcaacgggcgctggcccgttttcgcgatgaaggcgcccaggcggtggtgatggaa
gtgtcttcccacgcgctggatcagggacgcctgaatggcaccccggtatcggtggccgtg
ttcaccaatctcagccgtgatcatctggattatcacggcgacatggaacagtacctggcg
gccaaggcgaagctgtttgagggggccgacctgtcgctcgcggtgatcaatctggatgac
ccggccggcgtgcgcctgcgtgagcgcctgccagcgcggctgccctgcatcaccttcggt
gatcacgccgacgcagtagtacgctgcgagcgcctgcaggccggcgcggacggcatccgc
tttgtattgaatgtggccggcacaaacgtgacggccagcgtgccgctgtatggccgtttc
aatcttgacaacctgatggcagtggccgccgtgctgcacgggctgggctacgatgccgac
gcgctggagcgcgccttcgctgcggtgacaccggtaccgggccgtatgcagcctgtcacg
ctggctggtacgccggcaccagtggtgctggtggattacgcccacaccccggatggcctg
gacaaagccctgcgtgctgcgcgcgtgcattttgccggccggctgcattgcgtggtcggt
tgcggcggcaaccgggatcgcggcaagcgtccggagatggcggcggtcgctgagcaactg
gccgacgtcgtggtgctgaccagcgacaacccgcgttttgaatcaccgcaggcgatcctg
gctgacatgcgcgccgggttggcccagcctgagcgggcccgcatcatcgtgcgccgcgac
gacgccattgccgaggcgattgggcaggcgggtgacaatgacgtggtgctgatcgcgggc
aaggggcacgagacgtatcaggaaatccagggccagcgctacccgatggatgatcgcgca
ctggcactggcggcactgcaggcacgtcgtgccggcggggagggcgcatga
DBGET
integrated database retrieval system