Aquidulcibacter paucihalophilus: KB221_12525
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Entry
KB221_12525 CDS
T09139
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
apah
Aquidulcibacter paucihalophilus
Pathway
apah00300
Lysine biosynthesis
apah00550
Peptidoglycan biosynthesis
apah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apah00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KB221_12525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KB221_12525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apah01011
]
KB221_12525
Enzymes [BR:
apah01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KB221_12525
Peptidoglycan biosynthesis and degradation proteins [BR:
apah01011
]
Precursor biosynthesis
Amino acid ligase
KB221_12525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
Motif
Other DBs
NCBI-ProteinID:
WIY68902
LinkDB
All DBs
Position
complement(2566842..2568311)
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AA seq
489 aa
AA seq
DB search
MSASRPGPIKLSELLRRDVAADPMITGVTSDSRKVAPGSLFVALPGSAADGRAFIPQALS
QGAAAVLAPSDTDARLAPVLITSGDVRRAYAIAARGFYGTQPATCVAVTGTNGKTSVAAF
CRQIWAALGLHAASMGTLGVLAQNGNVNRELTGPGLTSPDAADAARMLADLAVSGVTHLA
LEASSHGIDQRRLDGVTLQAAAFTNLSQDHLDYHGDMAAYRAAKLRLFETLLPRGRTAVL
NADSDAYSHFAAASIMSGLGVMAVGERGRDLSLIGRRATPEGQRLTIDARGSLHEVLLPL
AGAFQASNALVAAGLCIAAGETPERVLAGLEKITGAQGRLQRIPGSGRGEVYVDYAHTPD
GLETVLKALRPHATGRLIVVFGAGGDRDRAKRPMMGEIAGLLADVAIVTDDNPRSEDPAA
IRKAVRAACPSAREIGDRRAAIREAIDMMGDGDVVVIAGKGHEQGQIVGGVTHPFDDATE
AAEALRLHA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtcccggcccggcccgatcaagctgtcggaactgctgcgccgcgacgtggcg
gccgatccgatgatcaccggcgtcacctcggacagccgcaaggtcgccccggggtcgttg
ttcgtggccctgccgggcagcgccgccgacggccgcgccttcattccgcaggccctgtcg
cagggcgccgccgccgtgctggctccgtccgacaccgacgcgcgtctggccccggtgctg
atcacctcgggcgatgtgcgccgggcctatgcgatcgccgcgcggggcttctatggaacc
cagccggccacctgcgtcgctgtcaccggcaccaacggcaagacctcggtcgccgccttc
tgccgccagatctgggccgccctcggtctgcatgccgcgagcatgggaaccctcggggtt
ttggcccaaaatggtaacgttaaccgcgagttgacaggccccggcctgaccagtccggac
gccgccgacgcggcgcggatgctggccgatctggccgtcagcggcgtcacccacctggcg
ctcgaggcctcgtcgcacggcatcgaccagcgccggctggacggggtgaccctgcaggcg
gcggccttcaccaatctgagccaggaccacctcgactatcacggtgacatggccgcctat
cgcgccgccaagcttcgcctgttcgagaccctgctgccgcggggccggaccgcggtgctg
aacgccgacagcgacgcctattcccacttcgccgccgcctcgatcatgtccgggctgggc
gtgatggccgtcggcgagcggggccgggacctgtcgctgatcggacgccgcgccacgccc
gagggccagcgcctgacgatcgatgcgcgcgggtcgctgcatgaggtgctgctgcccctc
gccggtgccttccaggcctcgaacgccctggtcgccgccggcctgtgcatcgccgccgga
gagacacccgagcgggtgctggccgggctggagaaaatcaccggtgcccaggggcggctg
caacgcattccagggtcgggccgcggtgaggtctatgtcgactacgcccacacgcccgac
ggtcttgagacggtgctgaaggcgctgcgcccccatgcgacggggcggctgatcgtggtg
ttcggtgccggcggcgaccgggatcgggccaagcggccgatgatgggcgagatcgccggg
ctgctggcggatgtcgcgatcgtgacggacgacaatccccgctccgaagaccccgccgcc
atccgtaaggccgtgcgcgccgcctgcccctccgcccgcgagatcggcgaccgccgcgcc
gccatccgcgaggccatcgacatgatgggcgacggagatgtggtggtcatcgccggaaaa
gggcatgagcagggtcagattgtcggcggggtgacccatcccttcgacgacgccaccgaa
gccgctgaagccctgcgcctccatgcctga
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