KEGG   Andrographis paniculata: 127255727
Entry
127255727         CDS       T08689                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
apan  Andrographis paniculata
Pathway
apan03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:apan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127255727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apan03021]
    127255727
Enzymes [BR:apan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127255727
Transcription machinery [BR:apan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127255727
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 127255727
NCBI-ProteinID: XP_051137377
LinkDB
Position
Unknown
AA seq 1478 aa
MGIFSIKPQQSSMKESPRKVEESPMENSPGKVQVSLMDDDFSPVKLQQSLTDPDSYVVKD
VTPARLTGIHFSILSDEEAERVSVAVVGSVNEVSGPALGFPSLTAAQCLTCGGYNSRDCE
GHFGLINLPYTILHPYYMSEVSQILNKICPGCKSARHIEKGTAASDEPPRKCRYCSGGSK
LGYPKMKFKVSTNDVFAKTAIIVEANVAAADNSSEESLASDYWEIIPKDPASERDDLPPT
LRVLSPAQVYCMLKDVDSETLDSLLNRKNKIFLNSVLVTPNCLRVREFGQRLAIDETTRM
YRKLIDFRGTANQLSACVIERYRVSKIRPEKVSSMQKEYEKQSTNESASSGSGLRNIKDL
LLGKRTDNTFRMVVVGDPRIKVDEIGVPLRVAEEILILDHINDWNWEKLEPSCDSLLNRK
GCFAVRRNGERVVIWSKDMLRTGDEILRPLTDGDAVLINRPPSIHQHSLIALRVKVLPVK
YVVSINPLTCFPFRGDFDGDCLHGYVPQSIKAQVELSELVALDKQLINGQNGRNLMVLTQ
DTLTAAYLFVEDGVFLSKAEMQQLQMYTSYKPMLPAIVQPSSETPIWTGKQLFSLLLPQD
FEYNCPSSGVRISGGELALSSRSFSWLHDSSENLFQCLIRHCGEKALDFLNAGQDLLCEW
LMGMGLSVSLSDLYLSPDQDSRKNLLEDVSYALQKAEEFSDASLLMVDGNQDFLTGQFED
NEEMEEVWKETMSIARQTKAELFQASVSASKLILRDMQSLVYRCSSKKNSLIAMLNAGSK
GNLQKLVQHSMCLGLQHSLSPLSFSVPRNLSCSSWNHQKSDSGVPRLAGSHRIPNSYIPC
NIIANSFLSGLNPLECFVLSLTSRDGSFSGNADVAGMITRKLMFFMRDVIVGYDGIVKSN
YGNQVVQFNYSTEDMATPYHDSRIAGHPVGAIAACAISEAAYSALDQPVSVLESSPLLSL
KGVLECGSKKGSANKSASLFLSKSLGRWICGFEYGALEVKNHLECLVFSDIVSEIRICYS
ASKNNCNCPWVCHFHINKEVARKRQLTVTSIINSLYNNSKFPDERLIAANLPLRITRKKC
SEADIRKKSDTTICITAELTESSISEEFSDLDCLQDMMIPILLQTTIKGFPEFKKVDILW
KDDPNKPKIRHQTSGELYLRVVKSAKCDGDKFWSSLVDSCLRIRNLIDWERSRPDNIRSC
SEEFGIDAGWQFFVNSLHSTVSETGKSILPEHLIVTANCLSMTGEFASLTPKGLANQRNQ
TNTFSPLSLACLSNPSDVIAKAAKMDQMDALQGSLEALSWGQTPLLGTGHSFDIVYGGTG
HELSKSSDIYSLLRSHVESPDTNVAAKKATMPFISNNGPSQNISLVGIRKISDKLKRMLK
KFPKNHFLKGDDKTTAEMALRFHPNSKEKIGTGIKDIKIGSHPKHKEKCFFVVRSDGTQE
DFSYNKCINHALQTIDKDKEKGRKEKDVPVPVPEVGHG
NT seq 4437 nt   +upstreamnt  +downstreamnt
atgggtattttctccattaaacctcagcaatcctcaatgaaggaatcccccaggaaagtg
gaagaatccccaatggagaattccccagggaaagtgcaagtatctctgatggatgatgat
ttttcacctgtgaaattgcaacaatctttaacagatcctgattcatatgtggttaaggat
gttacacctgctcgcctgacgggtattcatttcagcattttatctgatgaagaggctgaa
agggtatcagtagctgttgtcggatcagttaatgaagtgtcaggccctgcattgggattt
ccttctttaactgctgcacaatgcttgacatgtggtggctacaattcgagggactgtgaa
gggcattttggtttgattaacttaccatatacaatcctccatccttattacatgtctgaa
gtttctcagattcttaataaaatctgccctggatgtaaatctgcccgtcatattgagaaa
ggtactgctgcatccgatgaaccgccaagaaaatgcagatattgtagtggaggttccaaa
ctaggctatccaaagatgaaattcaaagtatctacaaatgatgtgtttgcaaagactgca
attattgtcgaagccaatgtagctgctgcagataatagctctgaggaaagcctggcttca
gattattgggagataatccctaaagatcctgcatcagaacgtgatgatctgccacctacc
ctgcgtgttctgtcacctgctcaggtctattgtatgttgaaggatgttgactccgagact
ctagactcacttcttaatcgaaaaaacaaaatatttcttaactctgtacttgtcacccca
aattgccttcgagtgagagaatttgggcagcgcctagctattgatgaaactacaaggatg
tacagaaagcttattgattttagaggcacggcaaatcaattgagtgcttgtgtcattgag
agatacagagtttccaagattcgcccagagaaggtctctagcatgcaaaaagaatacgag
aagcagtcaaccaatgagtctgcttcaagtggatcagggctgagaaatataaaggactta
ctacttggaaagcggacagacaacactttccgcatggtggtggttggtgaccctagaatc
aaagtggatgaaattggtgtgcccttacgagttgcggaggaaattctgattttggatcac
ataaatgattggaattgggaaaagctagagccttcctgtgattcactgcttaatcggaag
ggatgtttcgctgttcgtaggaatggtgaaagggttgttatatggtctaaggacatgctg
aggacaggtgacgaaattctgaggcctcttacggatggagatgccgtgctgattaatagg
ccaccatctattcatcagcattctctgattgctctgcgtgtcaaagttcttccggtgaaa
tatgttgtctcaattaaccctctcacatgctttccattccgaggggactttgacggagac
tgccttcatggttatgttccacagtccataaaagctcaagtcgagttgagcgagcttgtg
gctttagacaaacagttaataaatggacagaatggtcgaaaccttatggtactaactcag
gatactttgactgccgcctacctttttgttgaggatggtgttttcctgagtaaggctgag
atgcaacagttgcaaatgtacacatcttacaagccgatgttgcctgctattgtccagccg
agttcagagactccgatttggactggaaagcaattgtttagcctgcttttgccccaggat
tttgaatataattgtccgtccagtggcgtacgcattagtggaggagagcttgctttgtca
tctcgttctttttcatggcttcatgacagttctgaaaacctctttcaatgtcttattaga
cattgtggcgagaaagcacttgacttcctcaatgctggacaagatcttctttgcgagtgg
ttgatgggaatggggctgagtgtttcattgtcagatctttatctctctcccgatcaagac
tctcggaaaaatcttctagaagatgtttcttatgccttacaaaaggctgaagagttttct
gatgcaagtttattaatggtggatggtaaccaagattttctcacaggacagtttgaagac
aatgaagagatggaagaggtttggaaggagacgatgtcaattgcgcgacagactaaggct
gaactctttcaagcttcggtttctgcttccaagttgattctaagggacatgcaaagcctt
gtttacagatgctctagcaaaaaaaactctcttatcgccatgctgaatgctgggagcaaa
gggaatttgcagaaattagttcagcatagtatgtgcttgggattgcagcattcgttatct
ccgttatccttttctgttccccgaaatctttcctgttcttcatggaatcatcaaaagagt
gattctggtgtcccaagattggctggttcccacagaatccccaactcatacattccatgc
aatataattgctaactccttcttgtcgggcttaaatcctctcgagtgttttgtactgtcg
ttgactagccgtgacggttcttttagtggcaatgcggatgttgctgggatgataactcgg
aagctgatgtttttcatgagagatgtaattgtcgggtatgatggaattgtcaaaagtaat
tatgggaatcaagttgttcagttcaattatagcactgaggatatggccacaccctaccat
gattctcgaattgctggacatccagtcggcgctatagctgcttgcgccatctcagaagct
gcatacagtgcgttagatcagcctgtcagcgtgctcgaatcatcgcctttattatctctc
aagggtgttttggaatgtggatccaagaaaggttctgcaaacaaaagtgcatcattattt
ttgtccaaaagtcttggaagatggatatgtggtttcgagtacggagctttagaagtcaag
aatcatctcgaatgtctggttttctccgacatagtttcggaaataaggatatgttattcg
gcatcgaaaaacaattgcaactgcccatgggtttgtcactttcatataaacaaggaagtt
gccaggaagagacagttgacggtgacgtctattatcaactctctttataacaacagtaaa
tttccggatgaaagattgatagcggcgaatcttcccctgcggattacaagaaagaaatgt
tctgaagctgacattcgcaagaaatccgataccacaatttgcatcacagctgaactaact
gagagctcgatatctgaagaattctccgacttggattgtcttcaagatatgatgatacca
attcttcttcaaactaccataaaagggtttccggagttcaagaaggttgatatcttatgg
aaagatgacccaaataagccaaagattcgtcaccaaacctcaggggaactttatctgaga
gtcgtcaagtcagcaaagtgtgatggagataaattttggagcagccttgttgatagttgt
ctcagaataagaaatttaatcgactgggagcgtagtcgtcccgataacattcgcagctgt
agtgaagaatttggaatcgacgccgggtggcaatttttcgtaaatagtttgcattccacc
gtcagcgaaaccggcaagtcgatccttccggaacatttgatcgtcactgccaattgcctc
tcaatgaccggagaatttgcatccttgactcccaaagggctggcgaatcaaagaaaccaa
acaaatactttctccccattaagtctggcctgcttatcgaatccaagcgatgtcatagct
aaagctgctaagatggatcaaatggatgctctgcaaggaagtttggaggctttgtcatgg
ggccaaactcccttactcggaaccggccattccttcgatatcgtctatggtggaacgggc
cacgaactgtctaagtcatcagatatctacagtttgttacgttcccatgttgaatctcct
gacactaatgttgccgccaagaaggcgacgatgcccttcatctcaaacaatggtccgtct
cagaatatctcgctggttgggatacggaagatctcggacaagctaaagcgaatgctgaaa
aagtttccgaagaaccatttcttgaaaggagatgacaagacgacggcagaaatggctctg
cgattccaccccaattcgaaggagaaaatcgggactggcattaaggatataaagattggg
agtcatcctaaacacaaagagaagtgcttttttgtggtgagaagtgatggaacccaagag
gacttctcttacaacaaatgcattaatcatgcgctccaaacgatcgacaaagacaaggag
aaggggaggaaagaaaaggatgtccctgtccctgtccctgaagtcggacatggttag

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