Andrographis paniculata: 127260889
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Entry
127260889 CDS
T08689
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
apan
Andrographis paniculata
Pathway
apan04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
127260889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127260889
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
127260889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
127260889
NCBI-ProteinID:
XP_051144862
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MGVPAFYRWLADRYPLCIVDVVEEEPAKNGTGGPLSVDISRPNPNGIEFDNLYLDMNGII
HPCFHPEGKPAPATYDDVFKAIFDYIDHLVSLVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAAVVAEEERLREEFEIEGEKPLPKEKTETSDSNVITPGTQFMAVLSVALQYYVQ
YRLNHIPGWHSFKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
SLATHEIHFSILREVINPPGSQEKCFLCGQVGHFAADCRGGSTGHNQDASGKLDIPIYKK
KYQFLNIWVLREYLGYEMDIPHPPFKIDFERLVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMHVYRKEFASMGGYLTDAGEVFLDRVEHFVQAVAVNEDQIFRKRARIQQAYENNEE
MKLKSRGEAIPEPTEDKVKLGEPGYKERYYCEKFEISDPAKINEVRTDVVLKYVEGLCWV
CRYYYQGVCSWQWYYPYHYAPFASDLKGLADFEITFFPGEPFKPFDQLLGTLPAASSSAL
PERYRMLMINPASPIFDFYPNDFEIDMNGKRFAWQGVAKLPFIDEKKLLSETKKLEETLT
EEEKFRNSVMFDLLYVHPRHPLAPTISLYYRLCQLEKFPWTIDTNSSGGMNGFIWLTNRN
GLRQFVPSPINGLEDLTNNQVLNITYLNPTPHTHIPKPPEGVTMPKKVVKHTDVKPSPTL
WHEDNGGRHHLGKERPQISGALSGPVLGEAAYRLVHNTLNIKPDHTNYHQGNNQFAHRQR
PAGPPGYQRGISEGTSSQYNSPNHRPRPTGQYGFEQGPGRYGNQGFDRGPGQYGHQGQRY
HDDQSFGNGHYGPRPGTGSSPRAYPNQNQSNRRTYNSQDRYAYQEQHHDVRNSLAGLNIG
GFNNSPPAAVPPRFASSGQAFQILQRPPPVQASGPLPPPPSKWIGRPAARNTVATQSNKQ
QQSSVTTSGHEQQQQMRMIYQVKTKTSQNLDNTKM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcccgctttttatcgatggctggcagatcggtaccctttgtgtattgtggat
gtcgtggaagaagagcccgccaagaacgggactggcggcccgctctcggtcgatatatcg
agaccgaaccctaatggcattgagtttgacaatctgtatttggatatgaatgggattatt
cacccctgttttcatccagaaggcaagcctgcacctgctacttatgatgatgtatttaaa
gccatatttgattacattgaccacctcgtctcgttggttcgtccaagaaagctcctatat
atggcgattgatggtgtagctcctagggcaaaaatgaaccagcaaaggtctcgtcggttt
agggctgctaaggatgcagcagcagttgtagccgaagaagaaagattgagggaagagttt
gaaattgaaggggaaaaaccattgccgaaagagaagactgaaacatccgattcaaatgta
atcacacctggcacacaatttatggcggtgctctctgtagcccttcagtattatgtgcag
tataggttgaaccacattcctggatggcattctttcaaggttattctttccgatgcaaat
gttcctggtgagggcgagcacaagattatgtcctacattcgtttacagcgcaaccttcct
ggttttgatccaaatactaggcattgtctctatggtctggatgcagacttgattatgctt
tcactggctactcatgaaatccacttttcaattttaagggaggtaatcaatcctccaggg
tctcaagaaaaatgttttctctgtggtcaagttggacattttgctgctgattgtcgaggt
ggatccactggccacaatcaagatgcaagtggaaagcttgacattcccatttataagaag
aaatatcagttcctcaacatctgggtattgcgagaatatttgggatatgagatggatatt
cctcatccaccattcaaaattgattttgaaaggctggtggatgactttgtgtttctatgt
ttttttgtcggcaacgacttccttcctcatatgccaacattagaaattagagagggtgcc
attaatttgctcatgcatgtatatagaaaggaatttgcatctatgggtggctatcttact
gatgctggtgaggtcttcttggaccgagtcgaacactttgttcaagcagttgcagttaat
gaagatcaaatatttagaaagagagctcgtatacagcaggcatacgagaataatgaagag
atgaaacttaaatcaagaggggaggctattccagagccaaccgaggacaaggtgaagttg
ggagagcctgggtataaagaaagatattattgtgagaaatttgagatttcagatccagca
aaaattaatgaagtcagaacagatgtggttttgaagtatgtagaagggctgtgttgggtt
tgccgctattactaccaaggtgtctgttcgtggcagtggtactatccgtatcattatgca
ccatttgcctcagatcttaaaggattagctgattttgagataacctttttccctggggag
ccctttaagccctttgatcaactattaggaactctgccagctgctagctcttctgcactg
cctgaaagatataggatgttgatgattaatcccgcatctccaatttttgatttctaccca
aatgatttcgaaattgatatgaatggaaagcgctttgcttggcagggtgttgcaaaattg
ccattcattgatgagaagaaattgctttccgagacaaagaagcttgaggagacattgacg
gaagaagagaaatttcgaaatagcgttatgtttgatttgctctatgttcatccacgccat
ccattggcgccaacaattagcctttactaccgtctttgtcagttggagaaatttccatgg
acgattgacactaattccagtggtggaatgaatggattcatatggctgactaatagaaat
ggcttgagacaatttgttccgtccccaataaatggcctggaagacctcacgaataatcaa
gttctaaatatcacctatctcaatccaacaccacatactcacattccaaagccccccgaa
ggtgtaactatgcctaagaaggttgtgaaacatactgatgtaaaaccgtccccgacgctc
tggcatgaagataacggtggaaggcaccatttaggcaaagaaagaccacaaatttccgga
gcattatccggtcctgtactgggagaagctgcttaccgtctggttcacaacacactgaac
atcaaaccagaccacacgaattatcatcagggaaataatcaattcgcgcatagacagagg
cctgctggaccacccggctaccagaggggcatttccgaggggacctctagccaatataat
tccccaaaccacaggccaagaccgaccgggcaatatgggtttgaacaaggacccgggcga
tacggaaatcagggatttgaccgtggaccgggccagtatggacatcaaggacagagatat
cacgacgaccaaagctttgggaatggccattatggcccccgtcccggcactggcagtagt
cctagagcctatccgaatcagaaccaaagtaaccgaagaacttacaactcgcaagatcgg
tatgcctatcaggaacagcatcacgacgtcagaaacagcctggctgggttgaacatcggt
ggtttcaacaattcaccgccagctgccgtgcctcccaggtttgcgagctccggtcaagcc
ttccaaatcctgcaacggccgccgcctgtgcaagcatccggcccccttccaccaccgcca
agtaagtggatcggcagacccgcagccaggaataccgtagcgacgcagagtaataagcag
caacaaagctcggtgacaacttctgggcacgaacagcaacagcagatgagaatgatctac
caagtcaaaactaagacgtctcagaatctcgacaacacaaaaatgtga
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