Candidatus Puniceispirillum marinum: SAR116_0213
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Entry
SAR116_0213 CDS
T01207
Name
(GenBank) 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00900
Terpenoid backbone biosynthesis
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
Module
apb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SAR116_0213
Enzymes [BR:
apb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SAR116_0213
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SAR116_0213
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Gene cluster
GFIT
Motif
Pfam:
YgbB
IspD
NTP_transf_3
Fe-ADH_2
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
ADE38456
UniProt:
D5BPH4
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All DBs
Position
complement(224070..225344)
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AA seq
424 aa
AA seq
DB search
MSDFAPTSASPTVAAIIVAAGYGQRMTAPDKPQSENIPKQFRQLGGKPVICWSLDAFAQH
ENITRIILVVGQGQEAHALAIINQHHSKHSEMVTIVKGGASRMQSVRNGMATLSDAGFDG
LVAIHDAARPLLQQGTLDALIGKLAISSAKDVAGVIPVLSVSDSLKQVKDNLITDVIDRD
KASAAQTPQLFHFQQIAPLYDNLAHENVTDDASIAMSAGLNVATIAGSRSLMKLTYEDDF
TFLEHLSRAAGKGQNTGSLMDIRLGNGFDVHKFGDTPGPITLCGIKIDSEFGLTAHSDGD
VGLHALCDALFGALADGDIGSHFPPSDDKWKDADSARFLHYAVEKCHNAKATIMHLDLTL
ICEYPKITPHRDAMRKRIAEITGLDISRIAVKATTSEGLGFTGRREGIAAQATATICYNS
AEPS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgcgcccacatccgcctctccgactgttgctgccattattgttgcggct
ggttatggacagcgcatgaccgcgccagataagccgcagagtgaaaatattcccaaacaa
ttccgtcaattaggtggcaagccggtgatctgctggtcacttgatgcctttgcccaacat
gaaaatataacccgcatcattctggttgtcggccaaggacaggaagcgcacgcactggcg
atcattaaccagcatcacagtaagcattctgaaatggttacgatcgtcaaaggtggcgcc
agccgcatgcagtctgtccgcaatggcatggctacactctcagacgctggttttgacggt
cttgtcgccattcacgacgccgcgcgcccgcttttacaacaaggcactcttgacgcgttg
ataggcaaactcgccatctcatcagcaaaagacgtggctggcgttattcctgtcttgtct
gtctctgatagcctgaaacaggtcaaagataatctgatcacagatgtcattgaccgggac
aaagccagcgcggcgcaaacgccacagctatttcactttcaacagattgccccattatac
gacaatctagcacatgaaaatgttaccgacgatgcaagtattgccatgtcggcagggttg
aatgtggcaactattgcgggttcaaggtcacttatgaagttgacctatgaagacgatttc
acatttctggaacatctttcccgcgccgctggcaagggacaaaatactggatcgcttatg
gatatacgacttggaaacggctttgatgtacataagtttggcgacacacccggccctatt
accctttgcggcataaagatagacagtgaatttgggttaacggcgcattcggatggtgat
gttggcctgcacgccttatgcgatgcgctttttggggcattagccgatggcgatatcgga
tcacatttcccgcccagcgacgacaaatggaaagatgccgatagcgccagatttttgcat
tatgcggttgaaaaatgccacaatgcaaaggcgaccatcatgcatcttgatctgacattg
atatgtgaatatccaaaaatcaccccacaccgtgacgctatgcgaaagcggatagccgaa
atcaccgggttggacataagccggattgcggtaaaagcaacaacatccgaaggtctcggt
tttaccggacgccgcgaaggcatcgccgcacaggcaaccgcaaccatctgttacaacagt
gctgaaccatcatga
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