Anaplasma phagocytophilum JM: WSQ_00680
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Entry
WSQ_00680 CDS
T02754
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
apha
Anaplasma phagocytophilum JM
Pathway
apha03030
DNA replication
apha03410
Base excision repair
apha03420
Nucleotide excision repair
apha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WSQ_00680
03410 Base excision repair
WSQ_00680
03420 Nucleotide excision repair
WSQ_00680
03430 Mismatch repair
WSQ_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apha03032
]
WSQ_00680
03400 DNA repair and recombination proteins [BR:
apha03400
]
WSQ_00680
Enzymes [BR:
apha01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
WSQ_00680
DNA replication proteins [BR:
apha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WSQ_00680
DNA repair and recombination proteins [BR:
apha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
WSQ_00680
NER (nucleotide excision repair)
GGR (global genome repair) factors
WSQ_00680
MMR (mismatch excision repair)
DNA ligase
WSQ_00680
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WSQ_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
DNA_ligase_ZBD
HHH_2
Nlig-Ia
PTCB-BRCT
Zn_ribbon_NUD
DUF4138
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AGR79868
LinkDB
All DBs
Position
complement(142657..144690)
Genome browser
AA seq
677 aa
AA seq
DB search
MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDY
EGVIGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPK
IDGLSFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKIANAPEVLEVRGEIYMH
HSDFEKLKDVCNFANPRNAAAGSIRQLNPKIAEERNLRYVAYCIVNSALASQEAILKQLA
EWGFCTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLLGSTSKYP
RWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASLHNLNEIARK
DIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFPSHCPSCGSTLSRAPGEVAMR
CTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFSLREKISHMN
LSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYSAWVRA
MTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEKLNILNEIANTETASPIS
GKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGSKLDTARKLGIQV
MNESEWKDLLKTVSNSE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgacagtcggcggcgtcttgctgatctaaatgcgcagctgaagcttcac
gatgttctatatcatgaacatgatgcaccggagatctcagatgctcagtatgatgcgctc
gtgcaggagaaacgtgagttattggaaaagttccccgagcttagcgcctataatgattat
gaaggagtaattggtgcactcacagtagatgccagattgcccaagattgcccatcgtgaa
cccatgttatctctggaaaattcctttactatacaggacgtagaaaagtttatctccagg
gtaaagcgttcacttaatatggatcctgaagtctctatcaccatagcttgtgaacctaaa
attgatggtttgtcatttgctgcattatacgaaaagggctctcttatacgggttgcaact
agaggaaatggccatttaggggaagatattacgaacaccgcaaaagtaatacgtaagctc
cctcacaaaatcgcaaatgctcctgaagttctggaagtccgaggtgaaatatacatgcac
cacagcgactttgaaaaactgaaggacgtatgtaactttgcgaatccacgcaatgccgca
gctggctctatccgtcaactaaatcctaaaattgcagaagagcggaatcttcgctatgtg
gcatattgtatagtcaatagcgccttagcttctcaagaagcaatattaaaacagcttgcc
gaatgggggttttgcactcatacagaggtacttttcgctgataatatggacgacgcgctg
tcgttccataccagaatgtataatacacgcagtactctagggtatgacattgatggaata
gtgtataaagtaaatgatacgcacctacaaaaactgcttggctccacaagtaagtatcct
agatgggccacagctcataagtttccttcaactgaggccatcactaaattgcgtgatatt
tctgtgcaggttggaagaacaggagttataacgcccatagcggaattggagcccataaat
atagggggcaccctggtatcgcgggcaagtcttcataaccttaacgagattgcccgtaaa
gatatacgtattggcgacagtgttatagtaaaaagggctggcgaggtcataccacaggta
gtaggcgtagaccataccgcacgttgtaattctgctgtgcctgaagagtatgtattcccc
tcgcattgtccatcatgtggaagtacacttagtagagcacctggagaagtagcgatgcgc
tgcacggctgaattatcatgtcaagcgcaggtgctggagcgagtgaagcactttgtatct
cgggatgggctaaatatagtaggtctaggagaaaaacaaatagagtttttctgcaatgca
tcatacatcagcaacgttgctgacattttttcgctcagagaaaagataagtcacatgaac
ttaagcgctgaacatggatggggagagaagtctatagccctgctcattaacgctatcaat
gccagtaccactgtgaaactgagtaatttcatttttgccttgggaatcaggttcatagga
aagggtgccgcaaagctgatcgcggaacactatagatcttatagcgcctgggtacgtgcc
atgacatcactggcgaatggagaagatcctgataatatacatggtattggcctcaaaagt
attgagtccttacgtgcgtttttctcaagtgaagacaatttgagagtactccaaacgctt
gaagaaaaactcaatatcttgaatgaaatcgcaaatacagagactgcgtctcccatttct
ggaaagactattgtattcactggcgtgttggaagatatgtcccgtaacgaagctgcgaaa
tatgcggaaactctaggggctaaagttgggaatactgtaactactaaaactgacatactt
gttgctggaagcaactcaggaagtaagctagacactgctagaaaactcggtattcaggtt
atgaatgagtcggagtggaaagatctactgaaaactgtatctaactccgagtaa
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