KEGG   Acyrthosiphon pisum (pea aphid): 100163080
Entry
100163080         CDS       T01076                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100163080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100163080
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     100163080
SSDB
Motif
Pfam: RRM_1 TDP-43_N RRM_PARP14_3 RRM_7 Nup35_RRM_2
Other DBs
NCBI-GeneID: 100163080
NCBI-ProteinID: XP_003247957
APHIDBASE: ACYPI004191
UniProt: A0A8R2NQC0
LinkDB
Position
A2:63782609..63790991
AA seq 392 aa
MSVKYVLVSDEEYGEAVELPLEDNGTLLLSTLTAQFPGASGLKFRTENNVVRGVRLADFR
FHVPDNEWGKTPYYCVFPKVENKRKIDDSVENPTAKTKRLETKLKCSDLVVLNIPYTYDE
QKLKEYFGQFGELLMLQIKRDKNGQSRGYGFLRYTNLESQVRVLSQRHKIDGRNCEVKVP
KSKEGNGSELSGKVFVGRVTEDLTADDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPE
VAASLCGEDHIVKDVSVRVSEAAPKPQAPKNRHQTPPPSEPWERSNNRHNDNYRNWYHSQ
HDNRGSVDMPNLQSLGINGQDSYNPMLPLSPAIVAAALTQAAGWSLANGRMMPPPPPPSG
NNQWSQHGLNSQRNNYNNRKRSNNDYNSSGNR
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtctgtcaagtatgtattggtgtctgacgaagaatatggtgaagcggtcgaactgcca
cttgaagacaatggtacattactgctatctacgttaacagcccagtttccgggggctagt
ggtcttaaatttcgcactgaaaacaatgttgtcagaggcgttcggttggctgacttccga
ttccatgtgcctgacaacgaatggggaaagacaccttactactgtgttttccctaaagtg
gaaaataagagaaagattgatgatagtgtagaaaatccaacagctaaaaccaagagatta
gagacaaaattgaaatgttcagacttagttgtcttaaatataccatatacttatgatgaa
caaaaattaaaagaatactttggtcaattcggagaactacttatgttgcagataaaaaga
gataaaaatggacaatctcgaggatatggatttttaagatatactaacttagaatcacaa
gtaagagttctttctcagcgtcacaagattgatggtcgtaattgtgaagttaaggttccc
aagtctaaggaaggtaatggttcagagctttctggaaaagtatttgtgggtcgtgtgaca
gaagatttaacagctgatgacattcgtgagtatttcagcaaatttggagaagtcatcaat
gtgttcgtacccaaaaatccattccgcggatttgcatttgtaactttccttgatcctgaa
gtagctgctagtttatgtggtgaagatcatattgttaaagacgtttcggtgcgtgtttcc
gaagccgccccaaaaccacaagctcccaaaaatcgtcatcaaactcccccacctagtgaa
ccctgggagcgttctaataatcgtcataatgacaattatcgaaattggtatcactcacaa
catgataatcgggggagtgtagacatgcctaatctacagtcattggggattaatggtcaa
gacagctataacccaatgttgcctttgagtccggctattgttgctgctgcattaacgcaa
gctgctggatggagtctagctaatggtcgtatgatgccaccaccaccgcctcctagtgga
aacaatcaatggtctcaacatggtcttaactctcaacgaaataactataataacaggaaa
cgttctaataatgattacaattcttcaggcaatcgctaa

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