Acyrthosiphon pisum (pea aphid): 100163943
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Entry
100163943 CDS
T01076
Name
(RefSeq) TAR DNA binding protein-like
KO
K23600
TAR DNA-binding protein 43
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100163943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100163943
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100163943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
TDP-43_N
RRM_7
RRM_PARP14_3
RL
Motif
Other DBs
NCBI-GeneID:
100163943
NCBI-ProteinID:
NP_001156444
APHIDBASE:
ACYPI004992
UniProt:
C4WXR5
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Position
A1:complement(90687026..90690833)
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AA seq
333 aa
AA seq
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MENTEKYIPVCECEGEDFMEIPLESDGTLSTATLSAYFPGVTGLKFRLDSYSPYRALRLY
DGKFHAPEGSWAGHKFYCVHPKGDKRKLEETDCKPSKGYHSMSCTDLIVLGLPYQLSETQ
MREYFVQFGKLVMVQIKRDASGNSKGFGFIRYEDYSSQAKALGQRHYVNNRWVEVKIPAS
KEGYYSKVPHKIFVGRLTEDISEPDLSKYFSQYGEITDVFIPKPFRAFGFVTFNDASVAQ
SLCDEDHIVKGVSLHISEANPKSDQNRDKQVSNQQQYMSSVLTNGMLAAALNQVAYQTQP
IPYQTHRTYGKVQDWKRRDLTNSETSNAISLFN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacagaaaagtatattccggtgtgtgaatgcgaaggcgaagattttatggag
ataccgttggagagcgatggtactctgtcaacagctacactgagcgcatactttcccgga
gtcacaggtctcaagttccgtcttgattcatattcaccgtatagagcacttagactgtac
gacggtaaattccacgctcccgaaggcagttgggctggtcacaagttctactgtgtccat
cccaagggtgataaaagaaaactagaagagactgactgcaaaccttctaagggttaccac
agtatgagttgtacggatctgattgttttgggtttaccttatcaactgtcagaaactcaa
atgcgagaatattttgtacaattcggaaaactagtcatggttcagataaagcgagatgcg
tctggaaattctaaaggatttgggtttattcgatatgaagattatagttctcaggcaaaa
gcccttggacagcggcattatgttaataatcgatgggttgaagtcaaaatacctgcctca
aaagaaggatattattctaaagtaccgcacaagatatttgtcggccgccttactgaagat
attagtgaacctgatttaagtaaatatttctctcagtatggcgagatcaccgatgtattc
ataccaaaaccatttagagcctttggttttgttacctttaatgatgcctctgtagcacaa
agcctctgtgatgaagaccatattgttaaaggagtatctcttcatatatctgaagcaaat
cctaagtctgaccaaaacagggataaacaagttagtaaccaacaacaatatatgagcagt
gttctaacaaatggaatgctcgctgcagcacttaaccaagttgcatatcaaacacaacca
attccttaccaaacccatcgtacgtatggaaaagtacaagactggaaacgccgggatcta
acgaattctgaaacttcgaatgcaatttctctatttaattag
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