Acyrthosiphon pisum (pea aphid): 100164708
Help
Entry
100164708 CDS
T01076
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100164708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100164708
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100164708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
TDP-43_N
RRM_7
RRM_PARP14_3
RRM_3
SET1_RBD
DUF2951
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100164708
NCBI-ProteinID:
XP_001948343
APHIDBASE:
ACYPI005698
UniProt:
A0A8R2A4F5
LinkDB
All DBs
Position
A2:67582061..67584325
Genome browser
AA seq
365 aa
AA seq
DB search
MYVQVSASENSDPIDMPTEDDNSLLLSTLEAQYPGVIGLKYRVNNRLRIVRLNEGKLYPP
EDGWLDRMYMCNFRNTPTEKRKHSEVDDCNKAEDDNSVSDMDLVVLGLPWKVTEEDLKKY
FTKFGQVEYTQIKTDLNGKSKGYGFVRFKHKKSQVRVMLERHNIEGRWCDVRIPNSKDKH
VNKVPRKVFIGQVSEDVDEDALKNYFIKFGEISDLFLPRPHRGFAFVTFTDPLSAQKVIG
KDHKVGDCCVVCTEAIPKKEMAPKWNDYDSRDRVKDRRRERSPNQPQAWSQDHIWDYDQE
YYDRLYSRGSGHQSVNNSYANDKNINSDMVAAAVNKAVMGVIGNLKGQGNQGDKLPGTDD
WWMRR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtacaagtatcagcaagtgaaaacagtgatcctattgacatgcctacggaagac
gacaacagtcttctgttatctacgttagaagcacagtatcctggagtaattggtttgaag
tatcgtgttaacaataggttgcgtatagtacgtctcaatgaaggcaaattgtatcctcct
gaagatggctggttagatcgtatgtatatgtgcaattttagaaatacacctacagaaaaa
cgtaagcacagtgaagttgatgattgtaataaggcagaagatgataacagtgtttctgat
atggatttggttgtactcggtttaccgtggaaggtaactgaagaggatttgaaaaaatat
ttcaccaaatttggtcaggtagaatatactcaaattaagactgatcttaatggtaaatca
aaagggtacggatttgtcaggtttaagcataagaaatctcaagtccgcgttatgctagaa
cggcacaacatcgaaggtcgatggtgtgatgtacgtataccaaatagtaaagataaacat
gtaaataaagttccgcgtaaagtatttataggtcaagtgtctgaagacgtggatgaagat
gcattaaaaaattattttatcaaatttggtgaaatatcagatttatttttacccagaccg
catagaggtttcgcatttgtgacgtttactgaccctttatcagctcaaaaggttattggt
aaagatcataaagttggtgactgttgtgtggtgtgtacagaagctatacccaaaaaagaa
atggctcccaaatggaatgattacgatagtagagacagagttaaggataggagaagagaa
cgatcgcccaatcagccacaagcctggtcccaagatcacatttgggactatgatcaggaa
tattacgaccggttatatagccgaggaagtggtcatcaatcagtcaataatagttatgca
aatgataagaatataaattcagacatggtagcagctgcagtgaacaaagcagttatggga
gtgattggaaatttgaaaggacagggtaatcaaggtgataaattaccaggaacagatgat
tggtggatgaggagatga
DBGET
integrated database retrieval system