KEGG   Acyrthosiphon pisum (pea aphid): 100164708
Entry
100164708         CDS       T01076                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100164708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100164708
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     100164708
SSDB
Motif
Pfam: RRM_1 TDP-43_N RRM_7 RRM_PARP14_3 RRM_3 SET1_RBD DUF2951 SAM_PNT
Other DBs
NCBI-GeneID: 100164708
NCBI-ProteinID: XP_001948343
APHIDBASE: ACYPI005698
UniProt: A0A8R2A4F5
LinkDB
Position
A2:67582061..67584325
AA seq 365 aa
MYVQVSASENSDPIDMPTEDDNSLLLSTLEAQYPGVIGLKYRVNNRLRIVRLNEGKLYPP
EDGWLDRMYMCNFRNTPTEKRKHSEVDDCNKAEDDNSVSDMDLVVLGLPWKVTEEDLKKY
FTKFGQVEYTQIKTDLNGKSKGYGFVRFKHKKSQVRVMLERHNIEGRWCDVRIPNSKDKH
VNKVPRKVFIGQVSEDVDEDALKNYFIKFGEISDLFLPRPHRGFAFVTFTDPLSAQKVIG
KDHKVGDCCVVCTEAIPKKEMAPKWNDYDSRDRVKDRRRERSPNQPQAWSQDHIWDYDQE
YYDRLYSRGSGHQSVNNSYANDKNINSDMVAAAVNKAVMGVIGNLKGQGNQGDKLPGTDD
WWMRR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtatgtacaagtatcagcaagtgaaaacagtgatcctattgacatgcctacggaagac
gacaacagtcttctgttatctacgttagaagcacagtatcctggagtaattggtttgaag
tatcgtgttaacaataggttgcgtatagtacgtctcaatgaaggcaaattgtatcctcct
gaagatggctggttagatcgtatgtatatgtgcaattttagaaatacacctacagaaaaa
cgtaagcacagtgaagttgatgattgtaataaggcagaagatgataacagtgtttctgat
atggatttggttgtactcggtttaccgtggaaggtaactgaagaggatttgaaaaaatat
ttcaccaaatttggtcaggtagaatatactcaaattaagactgatcttaatggtaaatca
aaagggtacggatttgtcaggtttaagcataagaaatctcaagtccgcgttatgctagaa
cggcacaacatcgaaggtcgatggtgtgatgtacgtataccaaatagtaaagataaacat
gtaaataaagttccgcgtaaagtatttataggtcaagtgtctgaagacgtggatgaagat
gcattaaaaaattattttatcaaatttggtgaaatatcagatttatttttacccagaccg
catagaggtttcgcatttgtgacgtttactgaccctttatcagctcaaaaggttattggt
aaagatcataaagttggtgactgttgtgtggtgtgtacagaagctatacccaaaaaagaa
atggctcccaaatggaatgattacgatagtagagacagagttaaggataggagaagagaa
cgatcgcccaatcagccacaagcctggtcccaagatcacatttgggactatgatcaggaa
tattacgaccggttatatagccgaggaagtggtcatcaatcagtcaataatagttatgca
aatgataagaatataaattcagacatggtagcagctgcagtgaacaaagcagttatggga
gtgattggaaatttgaaaggacagggtaatcaaggtgataaattaccaggaacagatgat
tggtggatgaggagatga

DBGET integrated database retrieval system