KEGG   Acyrthosiphon pisum (pea aphid): 100168351
Entry
100168351         CDS       T01076                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100168351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100168351
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     100168351
SSDB
Motif
Pfam: RRM_1 TDP-43_N RRM_PARP14_3 RRM_7 Nup35_RRM_2 WD-like_fungi Itf52_C
Other DBs
NCBI-GeneID: 100168351
NCBI-ProteinID: XP_008180089
APHIDBASE: ACYPI009059
UniProt: A0A8R2B3Y4
LinkDB
Position
A1:43445979..43452898
AA seq 409 aa
MSFVQVSETNDGDKEVVDLPLEKDGTLLLSTLRAQYPDACGLKYVAPDNGRTRALRLADD
KLHPPTDDGWGDIVYFCSFNKDNGQKRKLNEEFESDVERASKDPKSEATSTAWKNRDLLV
LGLPWKTTDEDLESYFSKYGELRMAQIKKTADGRSRGFGFIRFKEQESQVRSMLDSHVIN
GRRCEIKIPNIKDAFINEAPKKIFVGQLTESITQEDLEDYFKKFGDIVEVFVPRPFKGIA
FVSFTKPDAALTALDQDHTIKDIRLSVSVAMPKDKDQRSRGGRSSGGGGGGGGGGGGGSG
GNPYGGGRMRGSRDSYSSRDHYYDNGGWDDYDRGSSYSDRYRNNSRYDRKPYDSGRSYNS
GQVWRKNEYSDSSSVSQSKDVGGQFDPNLVAAVVEKTVRGVIGNMSKYE
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgtcgttcgtccaagtttccgaaacaaacgacggtgataaagaggtggtggacttgccg
ttggagaaagatggcaccctcttgttgtccacgcttcgtgcacaatatccggacgcttgc
ggcttaaagtacgtagctccggacaatggccgaactcgagctctacggcttgccgatgat
aagctacatccacctactgacgatgggtggggcgacattgtatacttttgttcattcaac
aaggataatggacagaaaaggaaattgaacgaagaatttgaaagtgatgttgagcgagca
tccaaggatcccaagtctgaggcaacatcaacagcttggaagaatcgtgatttacttgtg
ctcggtttaccatggaaaacgactgatgaggacttagaaagttactttagtaaatacggt
gaactgcgcatggcacaaattaaaaagacagctgatggtagatcaagaggttttggattc
atacgatttaaagaacaagaatctcaagtgcggtcaatgttagattctcatgtgataaat
ggaaggcgatgtgagattaaaataccaaacattaaggatgcatttataaatgaagcgccg
aagaaaatatttgtgggacaactgaccgaaagtataactcaagaagatctagaagactat
tttaaaaaatttggagatattgttgaagtgtttgttcctcgtccatttaaagggattgcc
tttgtatcattcaccaaaccagatgctgcactcactgctcttgaccaggatcataccatc
aaagatattcgtctcagtgtgtctgttgctatgcccaaagataaagaccaaagatcacgt
ggtggacgcagtagtggaggcggaggtggtggtggtggtggcggtggcggcggaagtggt
ggaaatccatatggcggtggtcgtatgagaggaagtcgagattcctacagtagtcgtgat
cactattatgataatggtggttgggatgattatgaccggggcagtagttattcagatcgt
tatagaaataatagtcgttatgatagaaagccatacgatagtggcagatcttacaattct
gggcaggtatggagaaaaaatgaatattctgattcatcgtctgtatcccaatctaaagat
gttggtggccagtttgatccaaatttagtggctgcagtagtagaaaagacagtgagagga
gtgattggaaatatgagcaaatatgaataa

DBGET integrated database retrieval system