KEGG   Arcanobacterium pinnipediorum: NG665_01975
Entry
NG665_01975       CDS       T08401                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
apii  Arcanobacterium pinnipediorum
Pathway
apii03030  DNA replication
apii03410  Base excision repair
apii03420  Nucleotide excision repair
apii03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NG665_01975
   03410 Base excision repair
    NG665_01975
   03420 Nucleotide excision repair
    NG665_01975
   03430 Mismatch repair
    NG665_01975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apii03032]
    NG665_01975
   03400 DNA repair and recombination proteins [BR:apii03400]
    NG665_01975
Enzymes [BR:apii01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     NG665_01975
DNA replication proteins [BR:apii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NG665_01975
DNA repair and recombination proteins [BR:apii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     NG665_01975
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NG665_01975
   MMR (mismatch excision repair)
    DNA ligase
     NG665_01975
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      NG665_01975
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia BRCT_2 HHH Mcl1_mid
Other DBs
NCBI-ProteinID: USR79783
UniProt: A0ABY5AIM6
LinkDB
Position
463371..465908
AA seq 845 aa
MSTQNLDQARSRWEELAPRLLHAQSVYYSTGDQVMVDATYDGLMRELRELEEKFPQLWTP
DSPTTKVGAKPVHNTLAPITHIQRMYSLQDVFSRQELAQWFAGISGELPSDTSLTTEVKI
DGLALNLTYRDGYLESAATRGDGIAGEDVTRNVRSISSIPHQLRGSHIPQLLEVRGEVFF
PVQAFHAYNASVAQRNALIDERNARISETNKEIAMRNREIKLANLSRPRADWEEEIALKR
RESHLKTFVNPRNAASGTMRQEDSASLALRSLDFIAHGIGAIKGIDAELEEQLAHQAGVY
RAFAQWGLPVSDVTQTHSSLAQINEFLDKYQHARDSLPFEFDGVVIKIDDRGVQERLGYT
TRVPRWAVAYKFPPTEVQTRLLDIRVQVGRTGRVTPYAVMEPVFVDGSTVSQATLHNPSE
VIRKGVKIGDVVVVRKAGDIIPEVLGPIVSERNGTETEFVMPKHCPECGAPIKALSEGDI
DLRCTNQRSCPAQLTQRVAHIGSRGALDIEGLGEEAARWLCHPDQNRADALTALATGHTL
TWEGEGGKSCSASLGFEERRARGIVDEHGAIIDHENIIAPSVQEELGLPPAQIPVLSTEA
KLFQLSATDLRDVWIWQAEKVAGEVTGNWKYVRAAWTKPQWSGKGEERTISKPSVASKTL
TTMLNEIDKAKGKDLWRKLVALNIRHVGPVASQALAQTYSSLDQMRQADLEELSAIDGVG
HIIASSFLDWFSQDWHQEIINQWSADGVDFTRRDLPRNTQQTLSGLTIVATGTLRNFTRD
GIKEAIVAAGGKATSSVSKKTDVVVAGENAGSKATKASELAIPILTEEQFEELLRTGVMP
ETQEE
NT seq 2538 nt   +upstreamnt  +downstreamnt
gtgagtacacaaaatttagatcaggcgcgctcgcgctgggaagaacttgctccgcgcttg
cttcacgcacaaagtgtttattattcgaccggtgatcaagtaatggttgatgccacctac
gatggccttatgcgcgagctacgcgagctcgaagagaaatttccacaactgtggacccca
gattcaccgacgacgaaagtcggtgctaaacccgtccacaacactcttgcgcctatcact
catatccagcggatgtattcgctccaagacgtgttttctcggcaagaactagctcaatgg
tttgctggaatttctggcgaattaccttccgatacgtctttgactacggaggttaaaatc
gacgggctagcgctcaacctcacctatcgagatggctatctcgaaagcgctgccactcgc
ggagatggaatcgctggcgaggacgtcacgcgcaacgtccgctcaatttcttctattcca
caccagttgcgcggctctcatatcccgcaacttctcgaagttcgcggagaagtgttcttc
cccgtccaagcatttcacgcctacaacgccagcgtcgcccaacgcaatgcgctcatcgat
gaacgcaacgctcggatcagcgaaaccaacaaagaaatagcgatgcgaaaccgtgagatt
aaactggctaacctttctcgcccgcgcgctgactgggaagaagagattgcgctcaagcgg
cgcgaaagccacctcaaaacttttgtcaatccacgcaatgccgcatcaggaacgatgcgg
caagaagattcggcctcgctagctttacgttccttagatttcatcgcccacggcattggt
gcaattaaaggaatcgatgccgaactagaagaacaattagctcaccaagcaggagtttat
cgagcattcgcccagtggggattaccggtttcagatgtgacccaaacgcattcctccttg
gctcagatcaacgaattcctagataaatatcagcacgcccgcgatagcctgccattcgaa
tttgacggagttgtcataaaaattgatgatcgaggtgtccaagagcgcctcggctatact
acccgtgtgccacggtgggcggtggcctataaattccctccaaccgaggttcaaacacga
ctcctcgacatccgagtccaagttggtcgaacaggacgcgtaaccccgtacgccgtgatg
gaaccagttttcgttgacggatcaacagtttctcaagcaacgctgcacaacccatccgaa
gttattcgcaaaggcgtaaaaatcggcgacgtcgtcgtcgtgcgtaaagctggcgatatt
attcccgaagttcttggccccatcgtctctgaacgcaacggcactgaaactgagtttgtg
atgcccaaacactgcccagagtgtggcgcaccgatcaaagcccttagcgaaggcgatatt
gatttgcgttgcacaaatcaacgctcctgcccagctcaattgacgcaacgcgtggcgcat
atcggttcgcgtggggcattagatattgaaggcctgggcgaagaagcagcacggtggctg
tgccatccagatcagaaccgagcagacgcacttactgcgttagccactggccataccttg
acttgggagggcgaaggcggaaagagctgttcagctagtttaggatttgaagaacggcgc
gcacgcggaatcgttgatgagcacggtgcgattattgatcatgagaacattattgcgcct
agtgtccaagaagaacttggcctgccgccggcacaaattccagttttgagcaccgaggcg
aagttattccagctcagcgctacggatttacgagacgtgtggatctggcaggcagaaaaa
gtagccggagaagtaaccggaaattggaaatatgttcgtgctgcgtggactaaaccgcag
tggtctggcaaaggcgaagaacgaacaatatctaagccatctgttgcctcaaaaacccta
acaactatgctcaacgagattgacaaagccaaaggtaaagacctgtggcgaaaactcgtc
gcactcaatatccgtcacgttggtccggttgcctcccaggcgttggcacagacatactcc
tccttggatcagatgcgccaagctgatctcgaagaattgtcagctatcgacggtgttggc
cacatcattgcgtcctccttcctggattggtttagccaagattggcaccaagagatcatc
aaccagtggagcgccgacggtgtggactttacccgaagggacctaccgcgcaatacgcaa
cagaccttgagtggtttaactattgttgcaactggaacgctacgcaacttcaccagagat
ggaatcaaagaagcgattgtggccgcaggtggcaaagccaccagttcggtatcgaagaag
accgacgtcgtcgtggctggagaaaacgcaggatcgaaagcaactaaggctagtgagttg
gcgatcccgatacttaccgaagaacagtttgaagaactcttgcgcacgggggttatgccc
gaaacgcaggaagaatag

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