Anas platyrhynchos (mallard): 101789679
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Entry
101789679 CDS
T02816
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X3
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03440
Homologous recombination
apla03460
Fanconi anemia pathway
apla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101789679 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
101789679 (BRCA1)
03460 Fanconi anemia pathway
101789679 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
apla01009
]
101789679 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apla04121
]
101789679 (BRCA1)
03036 Chromosome and associated proteins [BR:
apla03036
]
101789679 (BRCA1)
03400 DNA repair and recombination proteins [BR:
apla03400
]
101789679 (BRCA1)
Enzymes [BR:
apla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101789679 (BRCA1)
Protein phosphatases and associated proteins [BR:
apla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101789679 (BRCA1)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101789679 (BRCA1)
Multi subunit type E3
BRCC complex
101789679 (BRCA1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101789679 (BRCA1)
DNA repair and recombination proteins [BR:
apla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101789679 (BRCA1)
BRCA1-A complex
101789679 (BRCA1)
BRCA1-B complex
101789679 (BRCA1)
BRCA1-C complex
101789679 (BRCA1)
BRCA complex
101789679 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
101789679 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
BRCT_2
zf-C3HC4_3
zf-Nse
zf-RING_5
RING_XB3-XBAT31
BRCT_3
zf-RING_6
zf-RING_10
zf-MIZ
zf-ANAPC11
TEDC1
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
101789679
NCBI-ProteinID:
XP_027301205
Ensembl:
ENSAPLG00000003524
LinkDB
All DBs
Position
28:1774164..1797657
Genome browser
AA seq
1846 aa
AA seq
DB search
MDLAVVAAGEVQNVLLAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMYKLLSKKKKGVV
QCPLCKTEVTKRSLTENSRFKQLIEGLLEAIHAFELDTGVKFLNSHRLPKSSTEATAAKL
PCNESSVIQSKGFRNRKRSAKENEQENCSLQGANVDAQRADISVKRCSLRNRNQKHDLEK
GVFIELGTDSSEELCKQAGNTGLGNKEVVQISSEEKLEEPKSPEKGNEYSCNTRPTELRA
KEIILPNVIGESDFSKEALSKKSMQSVAEHANPDQVNEMECQSSPLNILSPDLLTERCDR
ANNASPLKDGDTSLSKNAEETGAEQTQCSNKSQEFDLEDSSENRPGKSKEIDAVVQSVED
VEMCESENNSEKESPLEKLLQPETPHCPTLHQVSRKRLKRSIQKVNEWFSKSDEILSSNS
SHDDPAEASDVSGEGDALSDKDSCISEKTSPVVGFMETTVSEGNKRWSKEKTDNIKDKIF
GKTYERERKSNPPIIMREILPTTKKEDVPAVQECLNNSRKDSLKRKRKPVRHLQPEDFIK
KKDVEEAGGCPQSVNTCLGDAEKKKCEESSALKENPPPEKRRGSTLAEFEEGASMSKNAT
EKVTCEHSGELELNNSDQKSTKNPSSAAKRCRRSTRTMCALQLVVDKNSASPDPAETLIE
SYPSSEEPRNADSEQRQVRRSRRLQLLSEEMAKETAKRAVIKEASKYDGDQEGPVFGVEK
TVLVRDSECKDLCEQQDISSCKPLTNLESADLEANAIQMSPKNSSETAKTGKRLFNPAPS
HQHSDLNSSSPRAGSEEGEVLGDPFLHQSPSKTVVQTASHLPEGKRAESCPTLPQDKEHS
TQNVPEGLRTEKSPMAKNVSELAKESEDSEQDTQYLRNIFRNSKRLSFSLYPAPRKACEI
DDVASEKLKMSYADQVEKRHSKYFNTENLQKEKTAENLSNVCEKEKMKNCESACASPVSC
TVSNAECACSGDCQDVSQVANQGNLMTPVRMGAASSEGKNRPQKGERGSEKTASTDAGAE
SVLRQNPVKSSKSQSVQSNTEEHVFQRTDLNTVSETCFSSESDQAEKAEFVDSEGPVLCF
QPGSMARPTACQQRSAEFNCKDAEKRRSKRRRLIGDEEPATQTASTGVPECLVAETLEET
FKGGCSDTSETPDGLMCSDDDSEENVSFCEAPRKDSSAVFVKSDLVKERDHGGVGSQPRS
TGIQRARRRAQKLQSSSEESSEDEDLPCFQALIFGKSASTPLQTNKQVTSALGSSGNPNT
LPRGGSREDKVQKTPEAALSNGCASPSQESECSVNLFSSQSNVSEESADGAQEPKKPLLQ
VHASKQQSNVSESKETLQSCAGRLKRRKTNSKDECQEDPNLGEASGYDSETSHVEDSCGP
FSQGEILSTQQKNAMQNNLKKLQQEMAALEAVLQEHGSQDSEPLPACRELLGPRSERTLA
VEQTRQRGAESTSEGSLENHKCSTSKGFSADEVHVIPSDSSNSEVKELEIERSPELPYPS
LKSSWSKRPDLEEDLRHDSVVENKAPQETKPVHEAVQEYSQSEEENADEKSGTKLNKASV
LNDLCGNVTRSPHASSSFVKPPHLQTAEATNSSAVVQNDNKSSSQGCKSKRSVCFPTSVL
HNAYGKENATNPVVTNRKKMSIVASGLKQSEHMVVQKFARKTQSTFSNHITDGTTHVIMK
TDKELVCERTLKYFLGIAGRKWVVSYQWVVQSFKEGMILDEENFEVRGDVINGRNHQGPK
RARQSLTEKIFKDFEICCYGPFTDMTTGHLEWMVELCGASVVKQLHLFTHKMNSTAVVVV
QPDAWMEGTSYKAIQQKNNVAVVTREWVLDSVACYECQELDAYLVS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggacctggccgtggttgccgctggagaggtgcagaatgtgctcttggctatgcagaag
aacttggagtgccccatttgtttggatgtagtgaaagagccggtttcaacaaaatgcgat
cacatattctgcaggttttgtatgtataaactcctcagcaaaaagaagaaaggtgtggta
cagtgtcctttgtgcaagactgaagttactaagagaagtcttacagaaaattccagattt
aagcagctgattgaaggactgttggaagctatccatgcatttgagcttgacactggagta
aaatttttaaacagccatcgccttcctaaatcatccacagaagccactgctgcaaagctt
ccatgtaatgaaagttctgtcatccaaagtaagggcttcagaaacaggaaaagaagtgct
aaagaaaatgaacaagaaaactgctccttgcagggagctaacgtggatgcacagcgtgca
gacatcagtgtgaaaaggtgttccctaagaaaccgaaaccagaaacatgacttagaaaaa
ggagtatttatagagcttggcactgattcatctgaagagctttgcaaacaggcaggcaat
actgggttaggaaacaaagaagtggttcagatttcatctgaagaaaagctagaagaaccg
aagagccctgagaaggggaatgaatattcttgcaatacacgacctaccgagctgagagct
aaagaaataattctaccaaatgtcataggtgaaagtgatttctcaaaggaagccttgagc
aagaaaagcatgcagagtgtcgctgaacatgcaaatcctgatcaagtgaacgagatggaa
tgccagagttctcctttaaacattctttccccagacctgctgacagagaggtgtgacaga
gcaaataatgccagtcccttaaaggatggggacacatctctttctaagaatgcagaagaa
acgggtgcagagcaaactcagtgcagtaataaaagccaagagtttgatttagaagatagt
tcagagaacagaccgggtaaaagcaaggaaatagatgctgttgtgcaaagtgtggaagat
gtggaaatgtgtgaatctgagaacaattctgaaaaagaatctcctctggagaagctcctt
cagccagagacaccacactgtcctacgctgcatcaggtgtctaggaagagattgaaacga
agcattcagaaagtcaatgaatggttttcaaaaagcgatgagattctatcttccaattca
tcccatgatgatcctgctgaggcaagtgatgtttcaggtgaaggagatgctttatcagat
aaagattcatgtatttcagagaagaccagccctgtggtgggtttcatggaaactacagtg
tctgaaggaaacaagaggtggtccaaagaaaaaacagacaacatcaaagacaaaatattt
ggtaaaacatatgagagagagaggaagtcaaatccccctattatcatgagagagatttta
cctactacaaaaaaggaagatgtgcctgctgttcaggagtgcttgaataattccagaaaa
gacagcctaaaacgaaaaaggaagcctgtccgtcacctacagcctgaggacttcatcaag
aaaaaagatgtagaagaggcaggtggatgccctcaaagtgttaacacgtgccttggagat
gctgaaaagaaaaaatgtgaagaaagttctgctcttaaggagaatcccccacctgagaaa
agaaggggtagtacgctagcagaatttgaggaaggagcatccatgtcgaaaaatgctact
gaaaaggtgacgtgtgagcactctggagagctagaactgaataactctgatcagaagagc
actaaaaatccaagttctgcagcaaaaagatgcagacgttcaactaggactatgtgtgct
ttacagttagtagtggataaaaactctgcttcccctgatccagctgagacgctgattgag
agctacccaagcagtgaagaaccacggaatgctgattctgagcaacggcaagtcaggcgc
agcaggaggctccagttactttctgaagaaatggcaaaagagacagcaaaaagggcagta
attaaagaagcgagcaaatatgatggtgaccaggaagggcctgtctttggggttgaaaag
actgtgttagttcgtgattctgaatgcaaagacctgtgtgagcagcaggatatatcgagt
tgcaagccactcaccaacctggagagtgctgatctagaagcaaacgcaatacagatgagt
ccaaaaaattcatctgagactgcaaaaactggaaaacgtctattcaatcctgcgccttca
caccagcattcagatttgaattcctcttcacccagagcaggttcagaagaaggtgaggtg
ctgggtgaccctttcctccaccagtctccttcaaagactgttgtgcaaactgcttcccac
ctgcctgaagggaagagggctgaatcgtgtcctactttaccccaggacaaagagcacagt
acacaaaatgttccagagggcctcagaactgaaaagtcaccgatggctaaaaatgtgtca
gaactggccaaggaatctgaggacagcgagcaagacacgcagtatctgcgcaatatattt
aggaattcaaagcgtctgtccttcagcctttatcctgctcccaggaaagcatgtgaaata
gatgacgttgcatctgagaagctaaaaatgtcatatgctgatcaggtagaaaaaaggcat
agtaaatacttcaatacagaaaacttgcagaaagagaaaactgccgagaacttgagtaat
gtttgtgagaaagagaagatgaagaactgtgagtctgcttgtgctagtcccgtgtcgtgc
actgtcagcaatgctgaatgtgcgtgctctggggactgtcaggatgtttcacaggttgct
aaccaagggaatttgatgacaccggtaagaatgggtgctgctagcagtgaaggaaaaaac
aggccacaaaagggagagcggggaagtgaaaagacagcgtcaactgacgcaggggcagaa
agcgtgttaagacagaatccagtcaaaagcagtaagagtcaaagtgttcagagcaataca
gaagagcacgttttccagaggacagatcttaacacagtcagtgaaacgtgcttcagttca
gaaagcgatcaagcagaaaaggccgaatttgttgacagcgaaggaccagtgctgtgtttt
cagcctgggtcaatggctcgtcctacagcttgtcagcaaaggtctgcagaattcaactgc
aaagacgctgagaaaagaaggagcaaaagaagacgattaataggggatgaagagccagca
acccaaactgccagcacaggggtgccggagtgtttggttgcagagactctggaagaaact
tttaaaggtggctgttcagatacgtctgaaacccctgatggcttaatgtgctccgatgat
gatagcgaagagaacgtcagcttctgtgaagctcctaggaaagacagttctgccgtgttt
gtaaaaagtgacttggtgaaggaacgagaccacggaggtgtcggttcccagccacgatct
acagggattcagagggctcggagaagggcacagaaactgcagtcttcgtctgaagaatct
agtgaggatgaagacctgccgtgttttcaggcgttaatatttggcaagtcggcaagcaca
cctttgcagaccaataaacaggtgacatctgcgttggggtcttcaggaaatcccaacacg
ttgcctcggggtggaagtcgtgaggacaaggtgcagaaaacgcctgaggctgccctaagc
aatggctgtgcttcaccaagccaggagtcagaatgctctgtgaatttgttttcttcccag
tccaacgtgtctgaagagtcagctgatggagcacaggagccgaagaaacctttattacaa
gttcatgcatccaaacaacagagcaatgtaagtgagagcaaagaaacccttcagagttgt
gctggacggctgaagagaagaaaaacaaactccaaagatgaatgccaggaagacccaaac
ctaggtgaagcatctggatatgacagtgaaacaagtcacgtagaggattcatgtgggcca
ttctctcagggtgaaatcctttctacacagcagaagaatgcaatgcagaacaacctgaag
aaactacaacaagaaatggctgcgcttgaagcagtgctacaggagcatggaagtcaggac
tccgagcccttacctgcgtgcagggagctgctgggtcccaggagtgaaagaacacttgca
gtggaacaaacaaggcaaagaggagcagagtcaacctcggaaggaagtcttgaaaatcac
aaatgcagcacttcaaagggattttcagctgatgaggtccatgttataccaagtgattct
tctaacagtgaagtaaaagaattagaaattgaaaggtctcctgaactgccgtatccttct
ctgaaatcctcttggtcaaagagaccagatctggaggaagaccttcggcatgatagtgtt
gtggagaacaaagctcctcaagagacaaagcctgtgcacgaagcagtgcaagaatatagt
cagagtgaagaagaaaatgcagatgagaagtctgggactaaattaaacaaggcatctgtc
ttaaatgatctctgtggaaatgtgaccaggagcccacatgcctcttcctcctttgtgaag
cctcctcaccttcaaactgcagaagcaacaaatagttctgcagtagttcagaacgataac
aaaagcagttcccaaggatgtaaatcgaagagaagtgtatgttttcctacatctgtcctg
cacaatgcatatgggaaagaaaatgctacaaatccagttgtgactaacaggaaaaaaatg
tcaattgtggcatcaggtctgaagcaaagtgaacacatggtggtccagaagtttgccaga
aaaactcaaagcactttttctaatcacattactgatggaacaacgcacgtcataatgaaa
acagataaggagctggtgtgtgaacggacactgaagtactttctgggtattgcaggaaga
aaatgggtagttagttatcagtgggtggttcagtcttttaaagaaggaatgatactggat
gaggagaactttgaagttagaggagatgtaatcaatgggagaaaccaccaaggtcctaag
agagcaaggcagtctctgactgaaaagatatttaaagactttgagatctgctgctatggt
cctttcactgatatgactacagggcatcttgaatggatggtggagctttgtggtgcctct
gtagtgaagcaacttcatctgttcacccacaaaatgaattccactgctgttgtggttgtg
cagccagatgcttggatggaaggcacaagctataaagcaatccagcaaaagaacaatgtt
gccgtggtgactcgagagtgggtgctagacagcgttgcttgctacgagtgccaggagctt
gacgcttaccttgtgtcctaa
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integrated database retrieval system
