Anas platyrhynchos (mallard): 101791175
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Entry
101791175 CDS
T02816
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101791175 (SCN4A)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101791175 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Nab1
Motif
Other DBs
NCBI-GeneID:
101791175
NCBI-ProteinID:
XP_038024574
Ensembl:
ENSAPLG00000004906
LinkDB
All DBs
Position
28:complement(6100952..6148457)
Genome browser
AA seq
1862 aa
AA seq
DB search
MPACSRQETAGRAQVSCEQNESMAGLPHIPGPENLRPFTPESLAAIEQRIAEAEALKIKR
QQVELPEEEELKPSSDLEAGKNLPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKS
IFRFSATPALYLLGPFHPIRRGAIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVE
YTFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTF
RVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCV
RWPPLNDTLLGDFGLDNDTLANATLYSNFTDSIDSNFTSNSTFDFEAYINDEANFYFLEG
ALDALLCGNSSDAGKCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQ
LTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEAQQKEEEFQQLME
QLKKHQEEQEKQLQDRRSSSGSLRSSTAEKKSDSDLNSDQDKAKDCNGRVVPKVVLERSA
TVIEFNPGNETEKSDSNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYK
FAHMFLVWDCCLPWLKLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVL
TVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECV
CKISLDCTLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGN
LVVLNLFLALLLSSFSADSLAASDDDGEMNNLQIAIGRITRGIDFVKSSVLMLLRRLWKG
KKVAPEEEQEPSKGDNSALNHVDTGQEPKSEYMDGVTGKEYLFMDELDHMNFINNPNLTV
QVPIASEESDLYEEETSTQSDTEDATVRKNPLSSDNASSLCSTVDYKPPPPEEEAVAEEA
EESNEPEECFTEACVKRFPCLYVDITSERGKVWWNIRKTCFRIVEHDWFETFIVFMILLS
SGALAFEDIYIEQRRVIRTVLEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLI
VDVSIVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVL
LVCLIFWLIFSIMGVNLFAGKYYRCVNTTSGELFEISVVNNKSDCMALLHTNEVRWVNVK
VNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAF
FTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQG
MVFDFVTKQVFDITIMILICLNMVTMMVETDDQSELKTDILYKINLVFIVIFTGECVLKM
FALRYYYFTIGWNIFDFVVVILSIAGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG
AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGN
SIICLFQITTSAGWDGLLSPILNSGPPDCDPELENPGSSVKGNCGNPSIGIFFFCSYIII
SFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFV
DTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEK
FMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALR
GDAPEKEGLIATKMHEMYGNSGTDVETAPAFSLAPVPSSETQDAPGEVKVWDGKRIVKES
LV
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctgcagccgccaagagaccgcaggccgagcgcaggtgtcctgcgagcagaat
gagagcatggccggcctgccgcacatcccgggccccgagaacctccgccccttcaccccc
gagtcgctggctgccatcgagcagcgcatcgccgaggcagaggcgctcaagataaagcgg
cagcaggtggagctgcccgaggaagaggagctcaagcccagcagtgacctggaagctggc
aagaacctgcccctcatctatggtgacccccccgtggagctcatcgggacacccctggag
gacctggaccctttctacaaggataagaagactttcatagtcctcaacaaagggaagtcc
atcttccgcttctcagcgactcctgccctctacctgctgggtcctttccaccccatccgg
agaggagccatcaaagtgctcatccattcattattcagcatgttcatcatgatcacaatt
ttaaccaactgcgtgtttatgacattgagcaacccaccggcgtggtccaagaatgtggaa
tacaccttcactggaatttacacctttgagtccctcatcaagatactgtcgagaggcttc
tgcattgatgactttacattcctgcgtgacccatggaattggctggacttcatggtcatc
tccatggcctacatcactgagttcgtggacctggggaacatatctgctctcaggaccttc
cgcgtcctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgttggg
gcgctcatccagtcagtgaagaagctctcggatgtcatgatcctcactgtcttctgcctg
agtgtctttgccctcattggcctccagctcttcatgggaaacctccggcacaagtgtgtg
cggtggccccccctcaatgacaccttgctgggggacttcgggctggacaacgacacattg
gccaatgcaacgctctacagcaacttcaccgacagtattgacagcaacttcaccagcaac
agcacctttgattttgaggcctacatcaacgatgaagcaaatttctactttctggaggga
gcgctcgatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgagggatac
gagtgcatgaaggcagggaggaaccccaactacggctacaccagctacgacaccttcagc
tgggctttcctggcgctgttccgcctcatgacgcaggacttctgggagaacctcttccag
ctgaccctgcgtgcagcagggaaaacatacatgatcttcttcgtggtggttatatttctg
ggttccttctacctgatcaacctcatcctggcggtggtggccatggcctatgcggaacaa
aacgacgccacaatgctggaggcgcagcagaaggaggaggaatttcagcagctcatggaa
cagctgaagaagcaccaggaggagcaagagaagcagttgcaggacaggcggtccagcagc
ggctccctgcgcagcagcacggccgagaagaagagcgactcggacctgaacagtgaccag
gacaaggcgaaggactgcaatgggcgagtggtccccaaggtggtgctggagcggtctgcc
acggtgattgaattcaacccaggcaatgagacggagaaatcagactccaaccacctcact
gtgggcaaccaagatgggccaggccttgagaagagagtggggagtgccatcagtgtcatc
tccaacgccgtggaagagctggaggaggctcaccagaagtgcccaccttggtggtacaaa
tttgctcacatgttcctggtctgggactgctgccttccatggctgaagctgaaggagttt
gtcaagctggtggtgatggacccctttgtggacctgggcatcaccatctgcatcgtgctc
aacacgctcttcatggccatggagcactaccccatgacggaggagtttgagaacgtgctg
actgtggggaacctggtctttacgggaatcttcacagcagagatggtcctgaagctcatt
gcgttggacccctatgagtatttccagcagggctggaacatatttgacagcatcatcgtc
accctgagcttggtggagctgggtctggccaacgtgcaggggctctccgtgctccgctcc
ttccgcttgctgagggttttcaaactcgccaagtcctggcccaccctcaacatgctgatc
aagatcattggcaactcagtgggtgctctggggaatctcaccctggtgttggccatcatc
gtcttcatcttcgccgtggtggggatgcagctcttcgggaagagctacatggagtgcgtg
tgcaagatctccttggactgcacactgccccgctggcacatgcatgacttcttccactcc
ttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatg
gaggtggccggccagaccatgtgcctcattgtcttcatgatggtcatggtcatcgggaac
ctcgtggtcctgaacctgttcttagctttgctgctgagttccttcagtgccgatagcctg
gcagcatcggatgatgatggcgagatgaacaacttgcagattgctatcggcagaatcacc
agggggatcgactttgtaaagagctctgtcctcatgctgctccgcaggctgtggaagggg
aagaaggtggccccagaggaagagcaggagcccagcaagggggacaattctgcgctgaac
cacgtggacactggccaggagcccaagtcggagtacatggacggagtcactgggaaagag
tatttgttcatggatgaactggaccacatgaatttcattaacaaccccaacctgacggtg
caggttcccattgcctcggaggagtccgacctctatgaggaggagacaagcacccagtca
gacaccgaggatgccacggtgagaaagaaccccctctccagcgacaatgcctcgtccctg
tgcagcaccgtggattacaagccaccgccgccggaggaggaggcagtggcagaagaggct
gaggagagcaacgagcctgaggagtgcttcaccgaagcctgtgtgaagaggtttccctgc
ctctacgtggacatcaccagcgagagagggaaggtctggtggaacatccggaaaacctgc
ttccgcatcgttgagcacgactggttcgagaccttcattgtcttcatgatcctcctcagc
agtggggcactggcttttgaggacatctacattgaacagcgacgggtgatacgcaccgtc
ctggagtacgccgacaaggtcttctcctacatcttcgtcatcgagatgttgctcaagtgg
gtggcctatggcttcaaggtttacttcaccaacgcgtggtgctggctggatttcctcatc
gtcgatgtttctattgtcagcctgacagcaaactggctgggatactccgagctgggagcc
atcaagtccctgcggacactgagggccctgagaccactgcgcgccctgtccagatttgaa
gggatgcgggtggtggtgaatgccttgctgggtgccatcccctccatcatgaacgttctg
ctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctctttgcgggg
aagtactaccgatgcgtaaacaccacctcgggggaactctttgaaatcagtgtggtgaac
aataagagtgactgcatggctctcctccacaccaacgaggtcagatgggtcaatgtcaag
gtcaactttgacaacgtgggcttgggatacctgtccttgctgcaggtggcaaccttcaaa
ggctggatggacatcatgtacgctgctgtggactcacgtgagattgaagaacagccatcg
tacgagatcaacctctacatgtacatctacttcgtcatcttcatcatctttggtgccttt
tttaccctgaacctcttcatcggtgtcatcattgacaacttcaaccagcagaagaaaaag
tttggaggcaaagacatcttcatgacggaagagcagaagaaatactataatgccatgaag
aagctcggctccaagaaaccacagaagcccatccccaggccctcgaacaagtttcaaggg
atggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgt
cttaacatggtgaccatgatggtcgaaacagatgatcaaagcgagctcaaaacagacatc
ctctacaaaatcaacctggtcttcatcgtcatcttcactggagagtgtgtgctaaaaatg
ttcgccttgcgctactactacttcactattggctggaacatatttgactttgtggtggtc
atcctctccattgcaggtattgtcctctcggacatcatagagaagtacttcgtatcaccc
acactcttcagggtcatcaggctggcaaggattggccgtgtcctccgactgatccgagga
gcaaaaggtatccggactctcctgtttgctctgatgatgtccctgcctgccctcttcaac
atcggcctcctgctgttcctcgtcatgttcatctactccatctttgggatgtccaacttc
gcctacgtaaagaaagaggcagggatcgatgacatcttcaattttgaaactttcgggaac
agcatcatctgcctcttccagatcaccacatcggcaggatgggatggtctgctcagcccc
atcctcaacagtggccctcccgactgtgaccccgaactggagaaccctggcagttcagta
aaagggaactgcggcaatccatccatcggcatcttcttcttctgcagctacatcatcatt
tccttccttattgtggtgaacatgtacatcgccatcatcctggagaatttcaacgtggcc
acagaggagagcagcgagccgctctgtgaagatgattttgaaatgttttatgaaacgtgg
gagaagtttgacccagatgccacccagttcatcgcgtacagcaccttgtctgactttgtg
gacaccttgcaggagccgctcaaaattcctaagccaaacaagatcaagctgatcaccatg
gatctaccgatggttgctggggacaaaatccactgtctggatattctctttgccctgaca
aaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggagaag
ttcatggccgcgaacccctcgaaggtttcctatgaacccatcaccaccactctgaaaagg
aagcacgaggaagtgtgtgctacaaaaatccagagggctttccggaggtacctcctgagg
cgctcggtgaagcaggcctcctacatgtacaggcacagtaaggatgaagatgccctgaga
ggggacgcgcctgagaaggaaggtctgatcgcaaccaaaatgcatgagatgtatgggaac
agtgggacagacgtggagacagccccggcctttagccttgcacctgtgccgagctcagag
actcaagatgctcccggtgaagtgaaagtgtgggatgggaaacgcattgtgaaggagtcg
cttgtataa
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