KEGG   Anas platyrhynchos (mallard): 101791521
Entry
101791521         CDS       T02816                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101791521 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apla03041]
    101791521 (SMNDC1)
Spliceosome [BR:apla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101791521 (SMNDC1)
 Complex B
    101791521 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    101791521 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 101791521
NCBI-ProteinID: XP_027315745
Ensembl: ENSAPLG00000004322
UniProt: A0A8B9STT2
LinkDB
Position
6:complement(27046071..27055118)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggacctggccaagcagctggccagctacaaggcgcagctgcagcaggtggag
gccgcgctgtcggggaacgcggagaacgaggacctgctgaagctgaagaaggacttgcag
gaagtcatagaattaaccaaagatctcctttcgacacaaccttcagaaactcttgcaagt
tctgacagttctgcttctgctctgcccagccactcctggaaggttggggacagatgtatg
gcaatatggagtgaagatggacagtgttatgaagctgagattgaagaaatagatgaggag
aatggaacagctgcagtcacttttgctggatatggcaatgctgaagttacaccgctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacctatg
tccaaaaaagagatgatagcccagcaacgcgagtataaaaagaaaaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
ttcaacaacagagcatattctaaaaacaaaaaaggccaggtgaagaggagtatttttgct
tctccagagagcgtaaccggcaaggttggagttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataatgtcaggcatttgatgcctcagtaa

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