KEGG   Anas platyrhynchos (mallard): 101792342
Entry
101792342         CDS       T02816                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla04060  Cytokine-cytokine receptor interaction
apla04672  Intestinal immune network for IgA production
apla04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:apla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101792342 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101792342 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    101792342 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:apla04052]
    101792342 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:apla00536]
    101792342 (CXCL12)
Cytokines and neuropeptides [BR:apla04052]
 Cytokines
  Chemokines
   101792342 (CXCL12)
Glycosaminoglycan binding proteins [BR:apla00536]
 Heparan sulfate / Heparin
  Chemokines
   101792342 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 101792342
NCBI-ProteinID: XP_027315681
UniProt: A0A8B9ZHI3
LinkDB
Position
6:complement(19360255..19377901)
AA seq 131 aa
MELRALALLAFALALVSLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq 396 nt   +upstreamnt  +downstreamnt
atggagctccgcgccctcgccctgctcgccttcgccctggccctcgtctccctctcggag
gagaaacccgtcagcctgacttaccgatgtccctgtcgattctacgagagcaacgtggcc
agagccaacattaagcacctcaaaatcctctccacccccaactgctcacttcagattgtt
gcaaggcttaagagcaacagcaagcaagtgtgcattgatcccaagctaaagtggatccag
gaatatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa

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