Anas platyrhynchos (mallard): 101792342
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Entry
101792342 CDS
T02816
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04060
Cytokine-cytokine receptor interaction
apla04672
Intestinal immune network for IgA production
apla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101792342 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101792342 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
101792342 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
apla04052
]
101792342 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
apla00536
]
101792342 (CXCL12)
Cytokines and neuropeptides [BR:
apla04052
]
Cytokines
Chemokines
101792342 (CXCL12)
Glycosaminoglycan binding proteins [BR:
apla00536
]
Heparan sulfate / Heparin
Chemokines
101792342 (CXCL12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
101792342
NCBI-ProteinID:
XP_027315681
UniProt:
A0A8B9ZHI3
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Position
6:complement(19360255..19377901)
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AA seq
131 aa
AA seq
DB search
MELRALALLAFALALVSLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgcgccctcgccctgctcgccttcgccctggccctcgtctccctctcggag
gagaaacccgtcagcctgacttaccgatgtccctgtcgattctacgagagcaacgtggcc
agagccaacattaagcacctcaaaatcctctccacccccaactgctcacttcagattgtt
gcaaggcttaagagcaacagcaagcaagtgtgcattgatcccaagctaaagtggatccag
gaatatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa
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