Anas platyrhynchos (mallard): 101793322 Help Entry 101793322         CDS       T02816                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism apla  Anas platyrhynchos (mallard) Pathway apla04115   p53 signaling pathway apla04145   Phagosome apla04148   Efferocytosis apla04350   TGF-beta signaling pathway apla04510   Focal adhesion apla04512   ECM-receptor interaction apla04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:apla00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     101793322 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101793322 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101793322 (THBS1)    04148 Efferocytosis     101793322 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     101793322 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101793322 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101793322 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:apla04131]     101793322 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:apla00536]     101793322 (THBS1) Membrane trafficking [BR:apla04131]  Endocytosis   Phagocytosis    Opsonins     101793322 (THBS1) Glycosaminoglycan binding proteins [BR:apla00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101793322 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS cEGF TSP1_CFP_C Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  101793322 NCBI-ProteinID:  XP_027314034 Ensembl:  ENSAPLG00000003908 UniProt:  A0A8B9QNY1 LinkDB All DBs Position 5:complement(39397271..39412672) Genome browser AA seq 1178 aa AA seqDB search MGPAALLVLVLLLLRGGSEARRTAESRADDNSVFDLFELIGFIRKGAGRRAPGVHLVKGP ESSSPAYRIEDASRIPAVPDAKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLAVEQKDG SGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCE KMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGC SSSTSAIITLDNPMNGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTT LQDRVRKVTEENELIAKVVQITPGVCIHNGIMHKNKEEWTIDSCTECTCQNSATICRKVS CPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNR CEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGK PCEGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCV GEAKGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCEDIDEC KEVPDACFHFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTD GTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYH CKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGD RCDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQ CDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD ACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDI SETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTF FINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGP GEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIM ADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt atggggccggcggcgctcctcgtcctcgtcctcctcctcctgcgcggcggctcggaggcc cggcgcacggcagagtccagggccgatgataacagcgtcttcgatctctttgagctcatt ggctttattcgcaagggagctgggcgccgggcgcccggggtgcacctggtgaagggaccc gagtcctccagccctgcttaccgcatcgaagatgccagccgcatccctgctgtccctgac gccaagttccaagacttgttagatgccatccatgccgagaagggcttcatccttctggcc actctccggcaagccaagaaaagcagaggcacgctgttggctgtggaacagaaggatggc tctggtcatgtcttcagcctagtttcaaacggcaaggcaggcaccctggacctgagcctc tccggtgatggcaagcagcagttggtgtctgtagaggatgccttgctggctacgggacac tggaagaacatcaccctgtttgtgcaggaagaccgggctcagctttatgtagggtgtgag aaaatggaaaatgctgaactggacattcccatccaaaacatcttcacaagggacctggcc agcagtgccagactccgtatcgccaaagggggagtcaatgacaacttccagggactgctg cagaatgtgcggtttgtctttggaacaactctggaaactatcctgaggaacaaaggctgc tccagctccactagtgcgatcattactttggacaaccccatgaatggttccagcccagct atccgcactaattacattggccataaaacaaaggacatccaagctgtctgtggcttttcc tgtgatgaactaaccaacatgtttgtggaactgcaagggttacggtccatggttacaacg cttcaagacagagttcgtaaagtgactgaagaaaatgagctcattgccaaagtggtccag attactcctggagtatgcattcataatgggatcatgcacaaaaacaaggaagagtggact attgacagctgtactgaatgtacttgccagaactctgccactatatgccgcaaagtgtct tgccctctcatgccttgttccaatgccactgtgcctgatggggaatgctgcccccgatgc tggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttcatgttcg gtgacctgtggcaatgggattcagcagagagggcgttcctgtgacagtctcaataatcgc tgtgaagggtcttctgtacagactcggacttgccaccttcaggagtgtgataagagattt aaacaggatggtggctggagccactggtcaccatggtcgtcatgttctgtcacttgtggc acgggcatgatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaa ccttgtgagggtgaggcaagagaaaccaagtcctgccagaaagatccttgcccaattaat ggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggactt caaaaacgcagccgtctctgcaataatcctgagcctcagtatggtgggaagacctgtgta ggtgaggctaaaggaactcaggtctgcaacaaacaggactgtccaattgatgggtgtctg tccaatccctgctttgctggaactacatgtaccagctcacctgatggttcctggaagtgt ggtgcctgtcctgctggctaccatggtgatggtatccactgcgaagatattgatgagtgc aaagaggttcctgatgcctgcttccacttcaatggagtgcacaggtgtgagaatactgaa cctgggtacaactgtttaccttgtccaccacgtttcactgggacacagccatttggtcgt agtgttgaggatgcaatggctaacaaacaggtgtgcaaaccaaggaacccatgtacagat ggaacacatgattgcaacaagaatgccaaatgtaactaccttggccacttcagtgaccca atgtatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagac actgacttggatggatggccaaatgagaatcttgtctgtgttgctaatgccacttaccac tgtaaaaaagataactgccctaatctccccaactccgggcaggaagactatgataaagat gggattggtgatgcttgtgacaatgatgatgatgacgatggtattcctgatgaccgggac aactgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgac cgttgtgataactgcccctacaatcacaaccctgatcagattgacactgataacaatgga gagggagatgcatgtgcagtggatattgatggagatggggttctcaatgaaagggacaat tgccaatatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcag tgtgataactgtccactggaacataatcctgaccaggaagacactgattctgaccgcata ggtgatgagtgcgacaacaaccaggacatagatgaagatggccatcaaaataatcttgat aactgtccctatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaaggtgat gcctgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgcagactg gttgccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagat gactttgaccaagacagtgtgccagacattgatgacatctgccctgaaaatgtggacatt agtgagaccgacttccgaaggtttcagatgattcccctggatcccaaagggacatcccaa aatgatccaaactgggttgtgcgtcaccagggtaaagagctggttcaaacagtcaactgt gaccctggccttgcagtcggttttgatgaattcaatgctgtagacttcagtggcaccttc ttcatcaatacagaaagggatgatgactatgctggcttcgtatttggctaccaatctagc agtcgtttctacgttgtcatgtggaagcagatcacacagtcttactgggactccacacca accaaagctcagggctactcaggtctctccatcaaagtagtgaattctactacaggtcca ggagaacaccttcgtaatgctctgtggcatacaggaaacactcctggccaggtaagaact ctgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatggcgcctt agccatagaccaaagactggctatatcagagttgtaatgtatgaagggaagaaaatcatg gcagactcaggaccgatctatgacaaaacttatgctggtggtcggctaggattatttgtc ttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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