Anas platyrhynchos (mallard): 101795359
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Entry
101795359 CDS
T02816
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101795359 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
101795359 (KDM2A)
04121 Ubiquitin system [BR:
apla04121
]
101795359 (KDM2A)
03036 Chromosome and associated proteins [BR:
apla03036
]
101795359 (KDM2A)
Enzymes [BR:
apla01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
101795359 (KDM2A)
Transcription factors [BR:
apla03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101795359 (KDM2A)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101795359 (KDM2A)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101795359 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
101795359 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
101795359
NCBI-ProteinID:
XP_038036571
LinkDB
All DBs
Position
5:30504979..30543521
Genome browser
AA seq
1272 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEEDA
AGKEPRRPVTRRSVLTSPVANGANVDYDELGRSCRSSLTGLKKSPSMDSSDSSRGSQNGQ
AWDPHGGSPRKNRRVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLL
EEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPTPRPTPVRPTV
SPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHS
VTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKCYQ
GDDAEKGQRAHQRTKARFPQKQRGWLGPSARRRVGCLRWQQSRWHLPALPRRPAYGYHVP
RRTVSTTAHGSGAAKKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPA
SPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVE
KAKLHGSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVMRHAPARMPPRGGG
EEELAAEEEEEEDDEDDENAEEGGVARLNGRGGRAQEGEESWMQREVWMSVFRYLTRREL
CECMRVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLT
WLVNRLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKP
SQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGS
STRNSLTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLY
CLSDEKLIQKIS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagccctggagtgtccttctcactctcttcagaagagtcggagatggagcct
gaagaagaaaggatccgctacagccaaagattgcgtggcacgatgaggcggcgttacgag
gatgacggcatctctgatgatgaaattgaagggaagaggacattcgacctcgaggaaaag
ctttccaccaacaagtttaactccaccttcgtcgtcttcatggaaggcaaagacttcaca
gttgaatacatccagcggggtggcctgagagaccctctcatcttcaggagctctgatggc
ttggggataaagatgccagatccggacttcagcgtgaatgatgtgcggctgtgcgtcggg
agccgacggatggtggatgtcatggatgtgaacacgcagagggacatcgagatgtctatg
gcgcagtgggcacgctactacgaaacacctgaggccgagcgggagaaactttacaacgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccagacacctgaaggagagtcagacggag
tccacaaacgctatcctggagatgcagtatccgaaggtgcaaaagtactgtctgatgagt
gtcaagggctgctacacagatttccacgtggacttcggaggtacttctgtgtggtaccat
atccaccgagggggaaagatattctggctgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggtgacatttttcttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgttagtttttggaggcaacttcttgcacagcttc
aacatccctatgcagctccggatctacagcatcgaagaccgcacacgggtcccaaacaag
tttcgttatcccttctattacgagatgtgctggtacgtgctggagcgctatgtctactgt
atcaccagccgctcacacctgaccaaggacttccagaaggaatcgctcagcatggatatg
gagctgagctcctcagactcagtgaacatggaggaggaggaggaggaagaggaggatgca
gcaggaaaggaacccaggcgaccagtcacaaggcggtctgttctcaccagccccgtagcc
aatggtgccaatgtagactacgatgaactgggcaggagctgtcggagcagcctgacaggt
ctgaagaagagcccatccatggactcttccgactccagccggggctcccaaaatggccag
gcctgggacccccacggcggcagcccgcgcaagaacaggagggtgcacctgacacagttc
gagctggaggggctgcgctgcctggtggacaaactcgagtcgctccccctgcacaagaag
tgtgttcccactggcatcgaagatgaggacgccctcatcgctgatgtcaagctgctgcta
gaagaatacgcaaacagcgaccccaaactggcacttacaggcgtccccatcgtccagtgg
cccaagagagataagctaaagctgcaggcacggctgagggtccgcctgcccaccatcccc
atcaccaagcctcacaccatgaagccaacgccccgcccgacccccgtcaggcccaccgtc
tctcccatcgtgtcgggtgcccggcggaggcgtgtgcggtgccggaaatgcaaggcctgc
atgcaaggcgagtgtggcatgtgccactactgcagggacatgaagaagttcggcgggcct
ggtcgcatgaagcagtcctgcgtcctccggcagtgcttagcgcccaggctgcctcactcg
gtcacgtgtgcactttgtggggaggtggatcagaatgaggactcgcaggactttgagaag
aagctcatggagtgctgcatctgcaatgagattgttcaccctggctgtttgcagatggat
ggagaaggactgctcaacgacgagctccccaactgctgggaatgtcccaaatgctaccag
ggtgacgacgcggagaagggccagagagctcatcagcgcaccaaggccaggttcccacag
aagcagcgaggttggctgggtccttcggccagacggcgagtgggctgcctgcggtggcag
cagtcccgctggcacctgccagcgctgcccaggaggccagcctacggctaccacgtcccc
cgtaggactgtgtccaccactgcacatggaagtggtgcagccaagaagcgcaaggtagag
gagagcgatgatgacacggcgcaagccaaggtgctgcggcccctgcggagctgcgaggag
cccctcacccctccacccaactcgcccacccccatgctgcagctgatccacgacccagcg
tctccacgaggcatggtgacgcgttcgtccccgggggccggccccagtgaccaccacagc
gccagcagggacgagcgcttcaagcggcggcagctgctgcggctccaggccaccgagcga
accatggtgcgggagaaggagaacaaccccagcggcaagaaggagctgtcggaggtggag
aaggccaagctgcacggctcctacctcaccgtgacgctccagcgccccaccaaagacgtc
cacggcacttctattgtccccaagctgcaagccatcacagcctcctccgccaacctgcag
cactctccccgtgtggtcatgcgccacgcaccagctaggatgcccccccggggcggtggg
gaggaggagctggctgccgaggaagaggaggaggaggacgatgaagacgacgagaacgcg
gaggaggggggggtggcccgcctcaatggcagagggggccgggcgcaggagggcgaggag
agctggatgcagcgcgaggtctggatgtccgtcttccgctacctcactcgcagggagctc
tgcgagtgcatgcgggtgtgcaagacctggtacaagtggtgctgtgacaagagattgtgg
acaaagatagatttgagcaggtgcaagtccatcaccccccaggcactgagcggcatcatc
aaaagacagccagtcagccttgacctcagctggaccaatatctccaaaaaacagctcacg
tggcttgtcaacaggctgccaggcttgaaagacctcatcttggcgggctgttcctggtct
gcagtctgtgctctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgg
gcagtaggaatcaaggaccctcagatccgggacttgctcacgcctccaacagacaaaccc
agtcaggacaatcgcagcaaactccgcaacatgatcgacttccggctcgccggcctggac
atcaccgacgccacgctgcggctgatcatccgccacatgcccctgctctcccgcctcgac
ctcagccactgcaaccaccttacagaccagtcggccaacctcctcacggccgtgggttct
tccacgcgcaactccctcaccgagctcaacatggcaggctgcaataagctgacggatcag
gccttgctgtacctgcgccgcatctccaacgtcaccctaattgacctgcgaggttgcaaa
cagatcacccgcaaagcctgtgagcacttcatctcggacctgtccatcaacagcctctac
tgcctgtccgatgagaagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
