KEGG   Anas platyrhynchos (mallard): 101796253
Entry
101796253         CDS       T02816                                 
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03018  RNA degradation
apla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101796253 (LSM3)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101796253 (LSM3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101796253 (LSM3)
   03041 Spliceosome [BR:apla03041]
    101796253 (LSM3)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101796253 (LSM3)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101796253 (LSM3)
Spliceosome [BR:apla03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101796253 (LSM3)
 Complex C
  U2 snRNP components
    101796253 (LSM3)
SSDB
Motif
Pfam: LSM TIG_SUH vATP-synt_E DUF150_C
Other DBs
NCBI-GeneID: 101796253
NCBI-ProteinID: XP_005025167
Ensembl: ENSAPLG00000014499
UniProt: A0A8B9T9S9
LinkDB
Position
13:complement(10839940..10842882)
AA seq 102 aa
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcggatgaggtggatcagcaacaaacaacaaatactgtagaggagccacttgatctc
atcagactcagtctagatgagcgaatctatgttaaaatgaggaatgacagagaactgaga
ggcagactacacgcatatgatcagcacttaaatatgattctgggtgatgtagaagaaact
gtaacaacaatagagattgatgaagaaacctatgaagaaatttataaatctaccaaaagg
aatattccgatgctctttgtcagaggtgacggcgttgtgcttgtagctcccccgttgagg
gttggctga

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