Anas platyrhynchos (mallard): 101796253
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Entry
101796253 CDS
T02816
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101796253 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
101796253 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101796253 (LSM3)
03041 Spliceosome [BR:
apla03041
]
101796253 (LSM3)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101796253 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
101796253 (LSM3)
Spliceosome [BR:
apla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101796253 (LSM3)
Complex C
U2 snRNP components
101796253 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
101796253
NCBI-ProteinID:
XP_005025167
Ensembl:
ENSAPLG00000014499
UniProt:
A0A8B9T9S9
LinkDB
All DBs
Position
13:complement(10839940..10842882)
Genome browser
AA seq
102 aa
AA seq
DB search
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggtggatcagcaacaaacaacaaatactgtagaggagccacttgatctc
atcagactcagtctagatgagcgaatctatgttaaaatgaggaatgacagagaactgaga
ggcagactacacgcatatgatcagcacttaaatatgattctgggtgatgtagaagaaact
gtaacaacaatagagattgatgaagaaacctatgaagaaatttataaatctaccaaaagg
aatattccgatgctctttgtcagaggtgacggcgttgtgcttgtagctcccccgttgagg
gttggctga
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