Anas platyrhynchos (mallard): 101797776
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Entry
101797776 CDS
T02816
Symbol
EFTUD2
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101797776 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101797776 (EFTUD2)
Spliceosome [BR:
apla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101797776 (EFTUD2)
Complex C
U5 SnRNP specific factors
101797776 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
101797776
NCBI-ProteinID:
XP_027301104
Ensembl:
ENSAPLG00000011036
UniProt:
A0A8B9R0I1
LinkDB
All DBs
Position
28:complement(5531693..5553274)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGREAKDLDELEDDDDDDDYGTTDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatctgtacgacgagttcgggaactacatcgggccggagctggactcggac
gatgaggacgacgagctgggcagggaggccaaggacctggacgagcttgaggatgatgac
gacgatgatgactatgggaccactgatgaagaccaccctgggatggaggtggtgctgcac
gaggataagaaatactatcccactgccgaggaggtgtacgggcctgaagtagagacgata
gtgcaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaaccaaa
aagttctccttgatggaacagacgttaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcaccat
ggcaagacttgttttgttgactgcctgatagaacagacgcacccagaaatccggaagcgc
tatgaccaggatctttgctacaccgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgactattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttccgatgaggtgacagcaggccttcgt
atctcagatggtgttgtgcttttcattgatgcagctgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaagactagcagtgactgtgtgcatcaacaaaata
gaccgcctgatcctggagctgaaattgccccctacagatgcctattacaaactccggcat
attgtagatgaagttaacggtctgataagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagatatcaattaccaagagttcgcg
aagcgactttggggtgacatctacttcaatccaaagacacggaagttcactaaaaaggcc
ccaactagtagttcccagcgcagttttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcctaggactctggatgaactcggc
atccacctgaccaaagaggaattgaaattgaacattcgaccgctcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatattccctcc
ccaaaggtgggagccaagacgaaaatcgagcatacctacactggtggcgttgactctgat
ctaggggaagccatgagtgaatgcgaccctgacggtccgctgatgtgtcacacgacaaaa
atgtacagcacagatgatggcgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctggccagcctgtgaaggtcctaggagaaaactataccctggaagatgaggag
gattcacagatctgcactgttggacgcctctggatctcggtggcaaggtatcacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggcgtggaccagcccatagtg
aagactgcaaccgtcacggagcctcgaggcaatgaggaggctcagatctttcgtcctttg
aaattcaacaccacgtctgtcatcaaaatagctgtagagccagtcaacccctctgagctc
cccaaaatgttagatggtcttcgcaaagtcaacaagagttacccctcgcttacaactaag
gtggaagagtcaggggaacacgtgatcctggggacaggggagctctatctggattgtgtg
atgcatgatctacggaagatgtattcggagattgatatcaaggtcgctgatccagttgtg
acgttctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaat
aagaagaacaagatcacaatgattgctgagcctctggagaagggacttgcggaggacatt
gaaaatgaagtggtccagataacgtggaacagaaagaaactgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagatgctact
ggcccaaacatcctcgtagatgatacgctaccctcagaggtggacaaggcactgctgggc
tctgtgaaggacagcatcgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgtaatgtgaagtttaagattctggatgcggtgattgctcaggagccc
ttgcacagaggcggaggacagatcatcccaacggcacggagagtggtgtattctgctttc
ctgatggccacccctcgcctgatggagccctactacttcgtggaggtgcaggcccctgct
gactgcgtttctgcggtgtacacggtgctggcccggcggagaggccacgtgacacaagat
gctccgatcccgggttcccctctctacaccatcaaagccttcatcccagccattgattcc
tttgggttcgagacagacctgaggacccacacgcagggacaagcattctcgctgtctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccacagccagccccacatctggccagagagttcatgattaagaccaggcgcagg
aagggcttgagcgaggatgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ctggccaagcaagatgttgttctcaactaccccatgtga
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