Anas platyrhynchos (mallard): 101802411 Help Entry 101802411         CDS       T02816                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism apla  Anas platyrhynchos (mallard) Pathway apla04010   MAPK signaling pathway apla04120   Ubiquitin mediated proteolysis apla04140   Autophagy - animal apla04144   Endocytosis apla04620   Toll-like receptor signaling pathway apla04621   NOD-like receptor signaling pathway apla04622   RIG-I-like receptor signaling pathway apla05132   Salmonella infection apla05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:apla00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101802411 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     101802411 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     101802411 (TRAF6)    04140 Autophagy - animal     101802411 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     101802411 (TRAF6)    04621 NOD-like receptor signaling pathway     101802411 (TRAF6)    04622 RIG-I-like receptor signaling pathway     101802411 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     101802411 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     101802411 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:apla04131]     101802411 (TRAF6)    04121 Ubiquitin system [BR:apla04121]     101802411 (TRAF6) Enzymes [BR:apla01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101802411 (TRAF6) Membrane trafficking [BR:apla04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     101802411 (TRAF6) Ubiquitin system [BR:apla04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     101802411 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 Med21 SlyX Sina_ZnF RING_XB3-XBAT31 TRAF3_RING PspA_IM30 zf-RING_11 DUF4455 HAP1_N U-box UPF0242 HMMR_N Spc29 DUF1664 CENP-F_leu_zip DUF16 Cortex-I_coil Motif Other DBs NCBI-GeneID:  101802411 NCBI-ProteinID:  NP_001297325 Ensembl:  ENSAPLG00000013488 UniProt:  X5FNT0 LinkDB All DBs Position 5:complement(50430732..50450642) Genome browser AA seq 545 aa AA seqDB search MSLLQSNNSCGARDLESGCCAAMASACSVGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCCMKMELRHLEDHQSHCDFSTVECPQCQGAFQKNHLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPAL FSHVSHAPYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNVHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQKEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQNLEQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGAA NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctacagagcaataacagttgtggagcccgagacctggaaagtggctgctgt gcagccatggccagcgcctgcagcgtaggagcgaaagaagacagtgtgagcgtcagcagc gggactggaaaccctccgagttcgtttacagaggaaacacaaggatatgacgtggagttt gatccgcccttggaaagtaaatatgagtgtccgatctgtctgatggcccttcgggaagca gtgcagacaccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagat gcaggtcacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgac aacttcgctaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgctgc atgaagatggagctgaggcatttagaggaccaccagtcgcattgtgatttctccaccgtg gaatgcccgcagtgccaaggagcctttcagaagaaccatctgaaagagcacatgacacag gagtgtccgcggcgtcaagtctgttgccccaactgtgccacatctatggcttatgaagat aaagagcttcatgaccaaacctgtccacttgccaatgtattttgtgaatattgcaacaca atgctcatcagacagcagatgcctaaccattacgataatgattgtcctactgccccagta ccatgtttttatagtgcctttgggtgtcctgaaaagatgcagaggaatgaactggcacga catatgcaggagttcactcaagttcacatgagaatgatggctcagagttttcaaaatatc agtgttactgctacaaatcctgtaccctttatcaatggactgccatttgagcctgccctc ttctcccatgtgtcacatgccccatataattgtaacccagaagttgagaacttcaaagaa actattcagcagttggaaggtcggctggtgagacaagatcaccagatcagagaactcatt gctaaaatggagacgcagaacgtccacatggcagaactcaaacgcactattcgaaatttg gagggaaaaatcactgaaatggaggcacagcaatgcaatggtatttatatatggaagatt gaaaacttcagtggacttcagaaagcacagaaagaagagagacctgttgtgatgcacagt cctggcttctatactggaaaacctggctacaagctgtgtttgcgcttgcatatccagtta ccaaatgctcagcgctgtgctaattttatctctctgtttgtccacactatgcaaggagaa tacgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa tcagaaggccctgaacggcagaatcatgaagaagtaatggaagccaagccggagttgctg gccttccagagaccaacaattcaccgcaatcctaaaggttttggttacgtgactttcatg cacctgcagaacttggagcaaagaaccttcgtaaaagatgacacccttctggtgcgctgt gaagttctaacgcggctagatttgaacagccttcgcagagaaggatttcaagctcgcagt actgatggtgctgcgtaa

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