Acanthaster planci (crown-of-thorns starfish): 110974997
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Entry
110974997 CDS
T05078
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110974997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aplc04131
]
110974997
04121 Ubiquitin system [BR:
aplc04121
]
110974997
Membrane trafficking [BR:
aplc04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110974997
Ubiquitin system [BR:
aplc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110974997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
F-box-like
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
F-box
Beta-prop_EML_2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
F-box_4
EIF3I
Beta-prop_EML
Beta-prop_SCAP
V1R
Motif
Other DBs
NCBI-GeneID:
110974997
NCBI-ProteinID:
XP_022082712
UniProt:
A0A8B7XR99
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MYDIASILLQYRGFWLTMDSCESEMTLTDLPCEFLVHVFRCLTARDLCKLASSSRLLREI
TNDDVLWRRLCQQKGWERYGTTRDICKEVPVNASVNARLLELWDPPTFPIDVLVTGSDWP
GLVETCKWKEVYMKAKHLEENFSNERYSVDTLESWTGPKRTFYNSENLEAPEQYIYNLAG
EGNCLAVGICNKTLQIWDLFSGKRRHIIHVNISSDCNALKMQDGIVVAGCLDSKIRTFSA
ETGAQLQFLTGHRLAVRCVFFDGETIVSVAQPNVKGDGEHTDSDVRVWNAEDGACRFIIR
SDSQDTYLVHAEYKERMVACAYSNKTIQVWNACDGCCIQRLVCDVNNLLTCHLGNGVIIG
TSDDFVVKIWGLVSRRCLKTFEVLFDRQEQHRVSFAFNGELLAGMLGRQLIVTNLDGEQR
ERFESVYPFCPDASSCFLGNELLTVCDGKWWFRYRLWAIGQEESGAEDFSEVDSNSSEPM
DYYFGGSDFSGWSPFWMSDTKVVCEDLDETDRSQIVVRHYW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacattgcttcgattctgctccagtacagaggcttttggctgacgatggattct
tgtgaatctgaaatgaccttgactgacctgccatgcgaatttctggtgcatgtgtttcgc
tgtctcactgcaagggatctctgcaaacttgcctcatccagccgactcttaagagaaata
accaatgacgatgtcttgtggcgccgtctttgtcaacaaaaaggatgggagcgctacggt
accactcgagacatttgcaaggaggtaccggttaacgccagcgtcaatgctcggctcctt
gaactatgggatcccccaaccttcccgattgatgttcttgtaactggttcagactggcct
ggactggtggaaacatgtaaatggaaggaagtgtatatgaaagcaaaacatcttgaggaa
aatttctcgaacgaacgttattctgtggatacactagagtcttggacgggtcccaagagg
acattctacaacagtgagaaccttgaggctccggaacagtatatttataatttggctggt
gaaggaaactgtttagctgtcggtatatgtaacaaaaccttgcaaatctgggatttattc
agcgggaaacgccgacatattatccatgtgaacattagttccgattgtaatgctctgaag
atgcaggatggcatcgtagttgcaggttgcttggacagtaagattcgcaccttctctgct
gagactggagcgcagcttcagtttctgacgggccatcgtctcgcagtacgttgcgttttc
ttcgatggagaaactattgtcagtgttgctcaaccaaacgttaagggtgacggagagcac
accgacagtgatgtgcgcgtctggaatgctgaagacggtgcgtgtcgctttatcatccga
agtgactctcaagacacttacctcgttcacgctgagtataaggaaaggatggtagcttgt
gcttacagtaacaaaacaattcaagtatggaatgcatgcgacggttgctgcatacagcga
cttgtttgtgacgtgaacaatttgcttacatgccatctcggaaatggtgtcatcatcggc
acttctgacgatttcgttgtgaagatatggggtctggtatcccgaagatgcctgaagaca
tttgaagtgctgtttgatcgacaggagcaacaccgtgtgtcttttgctttcaatggtgag
cttcttgctggcatgttgggtcgccagttgatagtgacaaatcttgatggagaacaacga
gagcgttttgaatctgtttatcccttctgtccagacgccagcagctgtttccttggtaac
gagctgctgacggtttgtgatggtaaatggtggttcaggtatcgtctatgggcgatcggc
caagaagagtcaggagcggaggatttctctgaagttgattcgaactcgagtgagccaatg
gattattactttggggggagtgatttttcgggttggtctcctttttggatgagtgacacc
aaagtggtctgcgaggacttagatgaaacagacagatcccagatagttgtccgacattat
tggtga
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integrated database retrieval system
