Acanthaster planci (crown-of-thorns starfish): 110975424
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Entry
110975424 CDS
T05078
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04120
Ubiquitin mediated proteolysis
aplc04140
Autophagy - animal
aplc04144
Endocytosis
aplc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110975424
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110975424
04140 Autophagy - animal
110975424
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110975424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aplc04131
]
110975424
04121 Ubiquitin system [BR:
aplc04121
]
110975424
Enzymes [BR:
aplc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110975424
Membrane trafficking [BR:
aplc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110975424
Ubiquitin system [BR:
aplc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110975424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
TRAF3_RING
zf-RING_5
zf-C3HC4_3
U-box
zf-rbx1
zf-C3HC4_5
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
110975424
NCBI-ProteinID:
XP_022083607
UniProt:
A0A8B7XTQ3
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MEEKSEKELALEEDLPRPPPGATVHPIPGPTLDSYVSVNDSTEGYDLRFEPQLEQKYECP
ICLMCLREPVQTECGHRFCRACIMRSLRDAGNRCPVDQLPLQKMFPDLCVRREIMDLMAH
CPHPDCEEIIELRNMETHQEMCPYGLQPCPNHCGEMLQRRHIDNHIKKDCSKRPVNCEFC
DTLIPLDHKQVHLDTCPKVTISCEYCRDAMIRERLMVHLKNICPKMVVLCRFHAIGCTEK
MERELMANHLSSSMEKHMELMAFRLEGMQDRRKHSSSPQEHEVPDLSMFEQHEYSVYPPN
TSPKVNQRIAHSGTSGVGTSSSSDTSVFSPLPLPTTSEVSYAPTFKAGATDVEKHAAKTL
DQDKIPQPHLKTSTSVPHQSEKPHVVHRFPSAEPRYPCAESRNTSVNSRILAADHRYSTG
DLNVQFRRFPSVESDYQEFDAGRTIQKLSGEVQALKDKMKVQEQRAALQKQEMIELHLSS
ERKIKEVTDSLVKLESRLCGGEFYWRLEGYSGLLQDASKGETSVRHSQGFYTGFYGYKLC
LRVNFNSPDSGHSQHISLFVHFMKGEFDDILDWPFTGTITLSILDQNDDTSKRKPISETL
VAKPELAAFLRPRTNRNHKGFGYMEFAPLEMLASGAYIKNDSIIIKVRVHKQT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaagtgagaaagaactggccctagaagaggacctacctcgtcccccacca
ggtgcaactgtacaccccataccaggtccaacactggattcatatgttagcgttaacgac
agcacagaaggttatgacttgaggtttgaacctcagttggaacagaagtatgagtgtcct
atttgcctcatgtgtttgcgtgaaccagtacaaacagaatgtggtcatcggttttgtcgt
gcatgcattatgcgatcattaagggatgcagggaaccggtgtcctgtagaccaattacca
ttgcaaaagatgtttcctgacctttgtgtaaggagggaaatcatggatttgatggcccac
tgtcctcatccagactgtgaagagattatagaactccgaaatatggagactcatcaagag
atgtgtccctatggtcttcagccttgtccaaatcactgtggtgaaatgttacagcgtcga
catattgacaaccacatcaagaaagactgttccaagcgaccagtcaactgtgaattctgt
gacactcttatacctttggatcacaagcaggtacatctagatacatgtccaaaggtgact
attagctgtgagtactgcagagacgctatgatacgagagagacttatggtacatcttaag
aatatctgtccaaagatggtggtcttgtgtcggttccatgcgattggctgcactgaaaag
atggagcgtgaattgatggcaaatcatctgtcatcatcaatggagaaacatatggagtta
atggccttcagattagaagggatgcaagatagacgtaagcattcctcatcaccccaagag
catgaggtaccagacctatctatgtttgaacagcatgaatattcagtttatccaccaaat
acaagtccaaaagtcaaccaacgcattgcacattcaggcaccagtggtgtgggtaccagt
tcatcctcagacacatcagtctttagcccgttgcctcttcccacaacatccgaagtaagc
tatgcaccaacattcaaggctggggctacagatgttgagaagcatgcagccaagacattg
gatcaagacaagattccacaacctcatctcaagacgtctacgagcgttccccatcaaagt
gaaaaacctcatgttgttcacagattcccctcagctgaacccagatacccttgtgctgaa
tccagaaatacttctgtcaattcaagaatcctagctgcagatcaccgttattcaactgga
gaccttaacgtacaatttcgccgatttccttcagtggaatctgattatcaagaatttgat
gctggaagaaccatacagaaattatctggggaagtgcaagctttgaaggataaaatgaag
gtgcaggaacagcgagcagcactgcagaagcaagaaatgattgaacttcatctaagttcc
gagcgtaaaataaaggaagtaacagattcactagtcaagttagagtctagactttgtggt
ggtgaattctattggagacttgaaggatactctggacttttgcaagacgcttctaagggt
gagactagtgtgcgacatagtcagggattttatacaggtttctatggctataaattgtgt
ttgcgagttaattttaactccccagatagtggccatagccaacatatctctctctttgtt
cacttcatgaaaggtgaatttgatgatattcttgactggcctttcacaggcaccatcact
ctgtcaattctagatcagaatgatgacacgtcaaagcgaaagccaatcagtgaaactctt
gtggccaaaccagaactagcggcattccttcggcctcgtacaaaccgtaaccataaggga
tttggatacatggaatttgcacccctagaaatgctggcaagtggagcatacattaagaat
gatagtatcataattaaggttagagttcataaacagacataa
DBGET
integrated database retrieval system
