Acanthaster planci (crown-of-thorns starfish): 110986732
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Entry
110986732 CDS
T05078
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110986732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110986732
Enzymes [BR:
aplc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110986732
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110986732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
110986732
NCBI-ProteinID:
XP_022104577
UniProt:
A0A8B7ZHV0
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MSDAGDLPSTSTADSVTVASRIPFAELAGFLEKVQKKHGTDGKRQMFREFLEKWREFHKQ
LHKNNLDTKDNFYPVLRLLLPQLERERVAYGIKEHTLAKLYIEILGLAKESTDAKKLLNY
RAPTAKQEAGDFASVAYFVLRNRCPEKGSLSIQDVNTCLDGIAASNAAKKKDVVKKNLMH
LLRNTSALEQKWLVRMIMKDMKSGLSQVSIFHAFHPDAEDFFNVTNNLSKLCADLRDPSV
RMNEVGISVFSAFSPMLGMRANLNQVEKLMEHKPFYIETKLDGERMQLHKEGNDYKYFSR
RSHDYSRSFGETPDDGSLTPYITNCFKRNVRNCILDGEMLAYNPDTKTFMTKGENFDIKT
LKDDEDLQVCYCVFDILLYNDKKLANLPLHERVEYIKEVFTPVEGRLHIVERREASSKQE
VVTALNDAIDNREEGIMIKNPNTTYLPDRRKGSGWLKIKPEYVDNLMDELDLLVVGGFFG
KGIRSQMVSHFLLAVAEPPEVPGEHPVKFIAFAKVGSGYTLKELYDFNQRLLPHLKVFKK
ENPPSFLQFTKEKPDMYVKPQHSFILQVKATEINSSTSYPTGCTLRFPRVEKVREDREWH
QCMTTDELENLRQASEGKLATKYAGLEGDEDVPSKKRKVATRTAKPVGVAARFMAADVSE
VTKVSEMFAEREFCVINGPPSHSKTELEKKIVEYGGQVVQNPGYETFCVLADKVNLKVRN
IISCDIYDVVRTEWLLTCLEEKKCLPWLPSHMIHVSPETKEQFSLLYDRHGDSYTEDVDA
EKLKEIFDKVGQEGDYHMLDSEAIAELEQKYFPGESPLGLFRLCKVYMDSTLIISDQSTH
IKDCSLDLVAMEMRFYGATVSPKMADDITHVVLDHSDKTRLPSYKKLLRQRRSKFHLVSP
EWVHACIEAGKMLSERRFELGLPAD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgctggcgatttgccgtcgacatcgactgctgactcagttacggtggccagt
cgcatcccgtttgctgagcttgctggcttcctggaaaaagtccaaaagaagcacggcaca
gacggcaagagacagatgtttcgtgagtttcttgagaagtggcgcgaatttcacaaacag
ctgcacaagaataatctagatacgaaagacaacttctaccccgtcttgaggcttctccta
ccccaactggagagagaaagggttgcctacgggatcaaggagcataccctggccaagctc
tacattgaaatcctcggtttggccaaagaaagcactgatgccaagaagctgctcaactac
agggcgccgaccgcaaagcaggaagctggggactttgccagtgtcgcgtactttgtccta
aggaacaggtgccctgagaaaggaagtttgagcattcaggacgtcaacacctgcctggat
ggcatagcggccagcaacgccgcaaagaagaaagacgtagtcaagaagaacctcatgcac
ctcttacggaacactagcgccctcgagcaaaaatggcttgtcagaatgatcatgaaggac
atgaagtctggactgagccaagtgtccatattccatgctttccatcctgatgctgaagac
ttttttaatgtcacaaacaacttgtccaagctttgtgctgacttgagggaccccagtgtg
cggatgaacgaagtcggaatctctgtcttctcagcgttcagccccatgctgggcatgagg
gcaaatctcaaccaggtcgagaagttgatggagcacaagcccttctacatcgagacgaag
ctggatggagagaggatgcagctgcataaggaaggaaatgactacaaatacttctcaaga
cgatcacatgactactctcgatcgtttggtgagactccagatgatggcagcctcactccc
tacataacaaactgcttcaaaaggaatgttcgtaactgtatcctggatggagagatgctt
gcctacaatccagacacgaagacattcatgacgaagggtgaaaattttgacataaagacc
ttgaaagatgacgaagatctccaagtctgctactgcgtgtttgacattcttctctacaat
gacaagaaactggccaacctccctcttcatgaacgagtcgagtacatcaaggaagtgttc
actcctgttgaaggcagacttcacattgtggagagacgggaagcaagttcaaagcaggag
gtcgtgacagctttgaatgatgccatcgacaaccgggaagaaggaattatgatcaagaac
cccaacaccacctacctgccagacaggaggaaaggcagtggatggctgaagatcaagcca
gagtacgtggacaatcttatggatgagttggatctcttggtggtagggggtttctttggc
aaggggattcgatcccagatggtatctcacttcctattggctgttgctgagcccccagaa
gtgcctggagagcatcctgtcaaatttattgcctttgcaaaggttgggtccggttacaca
cttaaagaattgtatgacttcaaccaacgcctgctcccacacttgaaagtctttaagaag
gaaaaccctccttcgtttctccaattcacgaaggaaaagccagacatgtatgtcaaacca
caacattccttcattctccaagtgaaagcgacagaaataaactcttcaacaagctaccca
actgggtgcacgcttcgtttcccgcgggtggaaaaggtgcgagaggacagggagtggcac
caatgcatgacgacggatgagctggaaaatctaagacaggcatcggagggcaagctagca
acaaagtatgctggcctggagggggacgaagatgtaccaagcaagaagaggaaggtagcc
actcgaacggctaagcctgtcggcgtggctgctcgcttcatggccgctgatgtttcagag
gtcacaaaggtgtcagagatgtttgccgagcgcgaattttgtgtcatcaacggaccaccc
agccactccaagacagagttggagaagaagatcgtggagtacggagggcaggtggttcag
aacccggggtatgaaacgttctgcgtcttagccgacaaggtcaacctgaaagtgcggaac
atcatcagctgtgatatctatgatgtggtcagaacggagtggcttctgacatgtttggag
gagaagaaatgccttccttggctaccaagtcacatgattcacgtctccccagaaaccaaa
gaacagttttcattgctgtacgatcgtcatggggatagctacacagaagatgtggacgcg
gagaagctcaaggaaatctttgacaaagtcggtcaagagggcgattatcatatgctcgac
agcgaggccatcgcggagctggaacagaagtattttcccggggagtcccccttggggctg
ttccgactctgcaaggtgtacatggactcaactctcatcatcagtgaccaatcaactcac
ataaaagactgcagcttggatctggttgccatggagatgcgtttctatggtgccaccgtc
tcacccaagatggctgatgacatcacccatgttgtcttggatcacagtgacaagacacgg
cttccctcgtacaagaaattgctgagacagcgaaggagtaagtttcatctggtgtcgccg
gagtgggtgcacgcttgcatcgaggcaggcaagatgctgtcagaaaggaggtttgaactg
ggcctgccagccgattag
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