Agrilus planipennis (emerald ash borer): 112903963
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Entry
112903963 CDS
T07419
Name
(RefSeq) TAR DNA-binding protein 43-like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112903963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
112903963
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112903963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
TDP-43_C
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
112903963
NCBI-ProteinID:
XP_025834274
UniProt:
A0A7F5RE64
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MRVLAQRHMIDGRWCDVKVPNSKEGLIQQVPCKVFIGRCTEDLTADDLREYFGKFGEVTD
VFIPKPFRAFSFVTFLDPEVAQSLCGEDHIIKGVSVHVSNAAPKSDNRGGYGSGGGRGPG
GHGGRGPGSNGPDGPGMYNQRYGPGPNQNNWGNQGGPRGNLDMPNLQALGITGQQGQSGQ
QQNCNPLGLGLNLGALPMNPALVAAALNQASWGLIGNLQNQGEPNFNQGFNNPPNSNSGS
NANGGNQGGGNNPGFLSWMNQGQGQDGQWPRPPPQQQQQDKGFLKYD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtactagcccaaaggcacatgattgatggacgatggtgtgatgtgaaggttccc
aactcaaaggaaggattgattcagcaagtaccttgtaaagtatttataggacgttgcaca
gaagatctgactgctgatgacttaagagagtattttggtaaatttggagaagttacagat
gtttttataccaaaaccattccgagcattcagctttgttacttttctggaccctgaagtt
gcccagagtttgtgtggagaagaccatatcataaaaggtgtatctgtgcatgtgtcgaat
gcggctcccaaatcggacaatcgtgggggctacggtagtgggggcggtcgaggaccggga
ggacatgggggtcgcggtcctggatctaacggtcccgacggtcctggtatgtacaatcaa
cgctatggtccaggtcccaaccagaacaattggggcaaccaaggtggtcctcgaggaaat
ctggacatgccaaatttgcaagctttgggtattacaggtcagcaaggtcagagtggtcag
caacaaaactgcaaccctcttgggctgggccttaatttgggcgcgctccccatgaatcct
gcattagtagctgccgcacttaatcaagccagttggggccttataggcaatctccagaac
cagggtgagccaaactttaatcagggcttcaacaatccacccaatagcaattcaggtagt
aacgcgaacggtggcaatcaagggggaggtaacaatcccggtttcctgagctggatgaac
caaggccaaggtcaggacggtcagtggccgagaccgccgccgcagcaacagcagcaggac
aaaggttttttaaagtatgattaa
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