Alpha proteobacterium HIMB5: HIMB5_00001310
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Entry
HIMB5_00001310 CDS
T02250
Name
(GenBank) phytoene desaturase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00906
Carotenoid biosynthesis
apm01100
Metabolic pathways
apm01110
Biosynthesis of secondary metabolites
Module
apm_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
HIMB5_00001310
Enzymes [BR:
apm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
HIMB5_00001310
1.3.99.28 phytoene desaturase (neurosporene-forming)
HIMB5_00001310
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
HIMB5_00001310
1.3.99.31 phytoene desaturase (lycopene-forming)
HIMB5_00001310
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Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox_2
DAO
HI0933_like
FAD_oxidored
FAD_binding_2
GIDA
Pyr_redox
Pyr_redox_3
NAD_binding_9
OAR
SPASM
Motif
Other DBs
NCBI-ProteinID:
AFS46904
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Position
complement(125044..126501)
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AA seq
485 aa
AA seq
DB search
MNSVVIGSGFGGIATALRLKAKNHNVILIEKHEDLGGRARVFKKNGFTYDAGPTVITAPY
LINELFEIFNKKPEDYIKITPLKTWYQFIFEDDTKFNYSGNEEDMKNQIEKLNSQDVGGY
EKLVEFTKKIFNKGFLELADVPFEKPIFMMKQLPALLNLKSYKSVYSLVSSYIKNEKLRR
MLSMHPLLVGGNPFTTTSIYGLILYLEKKWGIHYSIGGTGNIIKGFEKLMNEVGIKIIKG
HEVSEIKSQGKNIQGVILDDGTNIDCQNVICNADPPAVYEKLLNKKNFTNFFKWKKNRME
YSMGLFVYYFGTKKIYDNVEHHTIKFGNKYKEHLDDIFNRKKLNNDISYYLHRPTATDKS
MAPEGHDCFYVLVPVPNNQSNIDWNIEGEKMKNLVIEKMEKQLMPNLKNNIVEDFYLTPD
YFEKELNTKYGSGFSIQPKFTQSAYFRFHNKSEIFNGLYFVGAGTHPGAGVPGVLSSAKV
LDKIL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagtagtaattggatctggatttggtggaattgcaacagccctcagactaaag
gctaaaaatcataatgttattttaattgaaaaacatgaagatttaggcggtagagctcgt
gtgttcaaaaaaaatggatttacatatgatgctggaccaactgtaattacagcaccttat
ttaataaatgaattatttgaaatctttaataagaaacctgaagattatataaaaattact
cctcttaaaacttggtatcaatttatatttgaagatgacacaaagtttaattattcagga
aatgaagaggatatgaaaaatcaaattgaaaaattaaattctcaagatgttggtggttat
gaaaaattagtagaatttactaaaaaaatttttaacaaaggcttccttgaattggccgat
gttccttttgaaaaaccaatctttatgatgaagcaattacctgctttattaaatcttaaa
agctataaatcagtttactcgctagtctcgtcatatatcaaaaatgaaaagttaagacga
atgctaagtatgcaccctcttttggttggcggtaatccatttacaacaacttctatatat
ggactgatactctacttagaaaaaaaatggggaattcattattctattgggggtactgga
aatatcattaaaggttttgaaaaactaatgaatgaggttggaataaaaattattaaaggt
catgaagtaagtgagataaaatctcagggaaaaaatatccaaggtgtaattttagatgat
ggaacaaatattgattgtcaaaatgtaatttgtaatgctgatccacctgcagtttatgag
aaacttttgaataaaaaaaattttacaaatttttttaaatggaaaaaaaacaggatggaa
tattctatgggtctatttgtttattattttggaacaaaaaaaatatatgacaatgttgaa
catcatacgattaaatttggaaataaatacaaagaacatcttgatgatatatttaatcga
aagaagttaaataatgacattagctattacttacatagacctacagcaacagataaatct
atggctccagagggacatgattgtttttacgtattagtgccagttccaaataatcaatca
aatattgattggaatattgaaggtgaaaaaatgaaaaatttggtaattgaaaaaatggaa
aaacaattaatgcctaatttaaaaaacaacattgttgaagatttttatttaacacctgat
tattttgaaaaagaactaaatacaaaatacggttcaggtttttcaattcagccaaaattt
actcaatcagcctacttcagatttcataataaatctgaaatttttaatggattatatttt
gtgggtgctggaacgcatcctggagcaggcgtccctggtgtattatcatctgctaaagtt
cttgataaaattttataa
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