KEGG   Alpha proteobacterium HIMB5: HIMB5_00013520
Entry
HIMB5_00013520    CDS       T02250                                 
Name
(GenBank) endonuclease III DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
apm  Alpha proteobacterium HIMB5
Pathway
apm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:apm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HIMB5_00013520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apm03400]
    HIMB5_00013520
Enzymes [BR:apm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HIMB5_00013520
DNA repair and recombination proteins [BR:apm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HIMB5_00013520
 Prokaryotic type
     HIMB5_00013520
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HHH_5 HHH_8 AraA_central
Other DBs
NCBI-ProteinID: AFS48090
UniProt: J9YYQ4
LinkDB
Position
1242689..1243342
AA seq 217 aa
MNEIQRAKIVLKILNKTYPRIEVPLKSRNVFTLLVSVLLSAQCTDVNVNNVTKDIYPKYF
KPEHFVKLGRKKIEILIKKIGIFRIKAKSIYNLSKILIENHKGKVPKTFEELEKLPGVGH
KTASVVMSQGFGYPAFPIDTHIHRLAQRWGLTNGKNVVQTEMDLKRLFPKKNWNKLHLQI
IYYGREYCKARNCFGISCKICTSCYPNRKKPFIAKKP
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaatgaaattcaaagagcaaaaatagtattaaaaatactaaataaaacataccccaga
attgaagtcccattaaaaagtaggaatgtatttactttgcttgtatcagttcttttgtca
gcacaatgtaccgatgttaatgtcaataatgtaacaaaagatatttacccaaaatatttt
aaacctgaacactttgttaaactaggaagaaaaaagatagaaatattaattaaaaaaatt
ggtatttttagaattaaagcgaaaagcatttataatctatcgaagattttaattgaaaat
cataaagggaaagttcctaaaacatttgaggagttggaaaaactaccaggtgttggtcat
aaaacagctagtgttgtgatgtctcagggatttggttatcctgcatttcccatagatacg
catatacatagacttgcacaaaggtggggtttgacaaatggaaaaaatgttgttcaaaca
gaaatggatttgaaaaggctattcccaaaaaaaaactggaataaacttcatcttcaaatt
atttattatggaagagaatattgcaaagcaagaaattgttttggaataagttgtaaaatt
tgtacttcttgctatcctaatagaaaaaaaccatttattgcaaaaaaaccataa

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