Actinobacillus porcitonsillarum: DDU33_06420
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Entry
DDU33_06420 CDS
T05443
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
apor
Actinobacillus porcitonsillarum
Brite
KEGG Orthology (KO) [BR:
apor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apor03009
]
DDU33_06420
Enzymes [BR:
apor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
DDU33_06420
Ribosome biogenesis [BR:
apor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDU33_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_4
Methyltransf_12
Methyltransf_32
Methyltransf_15
UPF0020
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AWI51134
UniProt:
A0A2U8FLB3
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Position
1317483..1318658
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AA seq
391 aa
AA seq
DB search
MNITCEHFNQQRCTSCQWLLTEYNVQIADKMAELKRLILPYLLQNQTEVLSPVASEQTHF
RNKAKMVVSGSVERPVLGLLKDQQDAQSGVDLTDCLLYPTEFATLFPVLKDFIGRAGLVP
YNIAKKKGELKYILLTQSQYNQAVSLRFVLRSTQKQPLIERELPKLLEKLPPKSIVSLNI
QPQHAAILEGETEIFLTPERVIEENFNGIPLFIRPQGFFQTNPKVASELYKTAQMWVKTL
PIQQCWDLFCGVGGFGLHCAKVLQETNPEVSLTGIEISASAIASATQSAEKLGLKNITFA
SLDSAQFALNEKGSVPDLVIVNPPRRGIGKALAEYLNQLGSPYVIYSSCNAKTMAEDFAS
FDNYVLAKVQLFDMFPHTAHYEVLTLLVKKA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacttgtgagcattttaatcaacaacgttgtacttcgtgccaatggttattg
accgagtataacgtgcagatagctgataaaatggcagagctcaagcggttgattttgcct
tatcttttgcaaaatcaaaccgaagttctttcgccagtggcttcggaacaaacacatttt
cgtaataaagctaaaatggtagtaagtggttcggtagagcgaccggtacttggcttatta
aaagatcagcaagatgcacaaagtggtgttgatttaacagattgtctgctttatccgacg
gaatttgcaacgctttttcctgttcttaaagattttattggcagggcaggcttagtgcct
tataacattgctaaaaagaagggcgagctaaaatatattttgctgacacagagccaatat
aatcaggctgtttcattacgtttcgtcttgcgttcaacacaaaaacaaccgcttattgaa
cgagaattgccaaagttactggaaaagctaccgcctaaatctattgtgagtttgaatatt
cagccgcaacacgccgctattttagagggagaaaccgagatttttcttacccctgaaagg
gttattgaagaaaattttaatggtattcctctgtttattcgtccgcaaggttttttccag
actaatcctaaagtggcaagcgaattatacaaaaccgcacaaatgtgggtaaaaacgtta
cctattcaacaatgttgggatcttttttgtggcgtgggaggatttggcttacattgtgca
aaagtattgcaagaaaccaatcctgaagtaagtttaacgggaattgaaatttcggcttca
gcgatagccagtgcgacacaatcggcagaaaaattagggttaaaaaatatcacctttgct
tcattagattccgcacaatttgctttgaatgagaaaggaagtgtgccggatctcgtgatt
gtaaacccgcctcgtcgggggattggtaaggcgcttgcagaatatttaaatcagctcggt
tcgccttatgtgatttattcgagctgtaatgcgaaaacaatggcggaagattttgcttca
tttgataactatgtattagcaaaagtgcagttatttgatatgttcccacatacggctcat
tatgaagttttgactttattagtaaagaaagcttaa
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