Candidatus Accumulibacter phosphatis: CAP2UW1_3629
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Entry
CAP2UW1_3629 CDS
T00966
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
app
Candidatus Accumulibacter phosphatis
Pathway
app03030
DNA replication
app03410
Base excision repair
app03420
Nucleotide excision repair
app03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
app00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAP2UW1_3629
03410 Base excision repair
CAP2UW1_3629
03420 Nucleotide excision repair
CAP2UW1_3629
03430 Mismatch repair
CAP2UW1_3629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
app03032
]
CAP2UW1_3629
03400 DNA repair and recombination proteins [BR:
app03400
]
CAP2UW1_3629
Enzymes [BR:
app01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CAP2UW1_3629
DNA replication proteins [BR:
app03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAP2UW1_3629
DNA repair and recombination proteins [BR:
app03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CAP2UW1_3629
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAP2UW1_3629
MMR (mismatch excision repair)
DNA ligase
CAP2UW1_3629
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAP2UW1_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
5_3_exonuc
DUF7340
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ACV36886
UniProt:
C7RKG6
LinkDB
All DBs
Position
complement(4137064..4139091)
Genome browser
AA seq
675 aa
AA seq
DB search
MGVSERLHSLRAEIERYDHEYYVLDAPSIADADYDRLFRELQALEAEHPELVSRDSPTQR
VGGAPLAEFAAVTHATAMLSLNNAFADDEVAAFDRRVREGLATDGEVDYSAEPKFDGLAV
GLSYAKGILVCGATRGDGSTGENVTANLRTLRSVPLRLRASDWPAALEVRGEVLMWRSDF
ERLNARQREKGEKEFVNPRNAAAGGLRQLDPRITAQRPLRFFAYGIASGERAGLPATHSA
QLDQLERWGFPVARERRRVTGLAGLLAYYADMGSRRASLPYDIDGVVYKLDDLAAQERLG
FLSRAPRFAVAHKFPAEEAVTELLDISIQVGRTGALTPVARLAPVFVGGVTVNNATLHNE
DEIRRKNVRIGDVVVVRRAGDVIPEVVRVVPDRRPAGAREFVMPTSCPVCGSRVVRSADE
AVARCSGGLYCPAQRKQALLHFASRRALDIEGLGDKLVEQLVDSAIVRTPGDLYRLGLLA
LASLERMADKSAGNLLAAIERSKRTTLARFIFALGIRNVGEATARELARHFGSLDRLLAA
DEDSLRQVPDVGPTVAQSIRQFCSEPHNLEVIEQLRAAGLVWSEGEPAVPAGGVFAGQVF
VLTGTLPSLTREAAKAMIEAAGGKVSGSVSKKTSFVVAGAEAGSKLERALQLGVQVIDEG
QLLGLLEQTMGPSTP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcagcgaacgtcttcacagcctgcgcgcggagatcgagcggtacgatcacgag
tactacgtcctcgacgcgccgtcgatcgctgatgccgactacgaccgcctcttccgcgag
ttgcaggcgctggaggccgaacaccccgaactggtgagcagggactctccgacgcagagg
gttggcggtgcgccgctggcggagttcgcggcggtcacacatgcgacagcgatgctgtcg
ctgaacaatgcctttgcggacgacgaagtggcggcgttcgaccgccgtgtgcgtgagggg
ctggcgacggacggtgaggtcgattactcggccgaacccaagttcgacggtctcgccgtc
ggcctgtcgtacgcaaagggcatcctggtctgcggcgcgacgcgtggcgacggttcgacc
ggcgagaacgtaacggccaatctgcgcactctgcgcagcgttccgctgcgtctccgcgcc
agcgactggccggcggcccttgaagtgcgcggcgaagtgctgatgtggcgcagcgacttc
gaacggctgaacgcgcgccaacgcgagaagggcgagaaggaattcgtcaatccgcgcaac
gccgctgcgggcggcctgcgccagctcgacccgcgcatcacggctcagcgtcctttgcgt
ttttttgcctacgggattgcttccggcgagcgtgccggcttgccggcaacgcattcggcc
cagctcgaccagctcgagcgctggggttttccggttgcccgggagcggcgccgggtcacc
ggcctggccggtcttctcgcctactatgccgacatgggcagccggcgcgcttctctgccc
tacgatatcgatggcgtggtctacaagctcgacgatctggctgcccaggaacgccttggt
ttcctttcgcgcgcgccgcgctttgccgtcgcgcacaagtttcccgccgaggaggcggtc
accgaactgctcgatatctcgattcaggtcggccgtaccggggcgctgacgccggtggcg
cgcctcgcgccggtctttgtcggcggcgtcacggtgaacaacgccacgctgcacaacgag
gacgagattcggcgcaagaacgtgcgcatcggcgacgtggtcgtcgtgcgccgcgctggc
gacgtcattcccgaggtcgtccgggtagttccggataggcgtcccgccggggcgcgcgaa
ttcgtcatgccgacaagctgtccggtttgcggctcgcgcgtcgtgcgcagtgccgacgag
gccgtggcacgttgcagtggcggtctctattgcccggcacagcgcaaacaggcgctgctg
cattttgcctcacggcgtgccctcgacatcgaaggcctcggcgacaagcttgtcgaacag
ctcgtcgacagtgcaatcgtgcgcacgccgggcgatctctaccggctcggcttgctggct
ctcgccagtctcgaacggatggccgacaagtcggcaggcaatctgctggcggcgatcgag
aggagcaagaggacgaccctggcgcgtttcattttcgcgctcgggatacgcaacgtcggg
gaagccaccgctcgggaactggcgcgtcacttcggtagcctggatcgtctgctggctgcc
gatgaggattcgctgcggcaggttcctgacgtcggtccgacggttgctcaaagcatccgc
cagttctgcagtgaaccacacaatctggaagtcatcgaacagctgcgtgccgccggtctc
gtgtggagcgaaggtgagccagcggtgccggccggtggcgtctttgctggccaggtcttc
gtcttgacgggaactctgccctcgctgacacgcgaagcagccaaagcgatgatcgaagcg
gcggggggcaaggtcagcggttcggtgtcgaagaagacgagtttcgtcgtcgccggcgcg
gaggccggcagcaagctcgaaagggcgctgcaactgggcgtgcaggtaatcgacgaaggc
cagttgctgggcctgctcgaacagaccatgggtccgtcgacgccatga
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