Anaerococcus prevotii: Apre_0981
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Entry
Apre_0981 CDS
T00964
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
apr
Anaerococcus prevotii
Pathway
apr03030
DNA replication
apr03410
Base excision repair
apr03420
Nucleotide excision repair
apr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Apre_0981
03410 Base excision repair
Apre_0981
03420 Nucleotide excision repair
Apre_0981
03430 Mismatch repair
Apre_0981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apr03032
]
Apre_0981
03400 DNA repair and recombination proteins [BR:
apr03400
]
Apre_0981
Enzymes [BR:
apr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Apre_0981
DNA replication proteins [BR:
apr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Apre_0981
DNA repair and recombination proteins [BR:
apr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Apre_0981
NER (nucleotide excision repair)
GGR (global genome repair) factors
Apre_0981
MMR (mismatch excision repair)
DNA ligase
Apre_0981
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Apre_0981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
BRCT_2
HHH
Nlig-Ia
DNA_ligase_ZBD
HHH_3
Zn_ribbon_PF0610
DUF7501
PhyR_sigma-like
DUF6487
DASH_Dad3
Motif
Other DBs
NCBI-ProteinID:
ACV29009
UniProt:
C7RHP8
LinkDB
All DBs
Position
complement(1050179..1052179)
Genome browser
AA seq
666 aa
AA seq
DB search
MDKREKIDKLIEKIENLNYHYYTLDEPLVSDGEYDQIYDELRKLEEETGYVRDDSPTQVV
GGEILDKFEKHFHITKLLSQNKAQTHEELEAWIDRCNRLRDDYNINHDDKLAELEYIMEY
KFDGLTVNLTYNNGNLVNAATRGNGIIGEEISPQVRTIRSIPNRIKEKSLLEIQGEALMP
LSELTRYNEENELQLKNARNAAAGALRNLNTKETAKRKLTAYFYSIPTNNLDFATEEDML
EFLKEQGLLIHPYHKKVHNLEEMLAELDFIEEERKNIDILTDGVVIKINDKRTQEVLGST
NKFPRWSIAYKFEAEEYTTTLREVVWNVGRSGKVTPSAILDPVEFSGATVSRATLNNYDD
IIRKKVRIGSKVFIRRSNDVIPEILGVVDENQEGTKEIEKPSKCPYCGSELIQGNVHIIC
PNSISCKPQLLARMEHFTSRNAMDIEGLSEKTIAQLMEELDINEVDDIYDLSYDDLINLD
RFGDKKTKNLLNAIEASKKVDLDNFIYAIGIPNVGERTSRDLANKFKSFDALRHASLEEL
SDIDDIGEITAQNIIEYFRDPNISKSIDNLLKKGIEISEVKADNNSDSLNDMTFVITGTI
DNYKRDDIKKLLESNGAKVTGSVSKNTDVVLAGEKSGSKKDKAKNLGIEIYENDKLYDFL
KELEGM
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggataagagagagaaaatagataaattaatagaaaaaatagagaatttaaactaccac
tattatactttggatgagcctctagtttctgatggagaatatgatcaaatctatgatgaa
cttagaaaactcgaagaggaaacaggctatgttagagatgattctcccacccaagtagtc
ggaggagaaatacttgataagtttgaaaagcattttcatataactaagctcttatctcaa
aacaaggcacagactcacgaagagctcgaagcttggattgataggtgtaatagattaaga
gatgactataatataaatcacgatgataaattagctgagcttgaatatataatggagtat
aaattcgatggtctaacagtaaacttaacctacaataatggtaatttagtaaatgctgcg
actaggggtaatggaatcatcggagaagaaatttctcctcaggttagaactattagatca
attcctaatagaattaaagagaagtctttactagaaatacaaggcgaagcactaatgccc
ttatcagaactaactcgttacaatgaggaaaatgaattgcagctaaagaatgctagaaat
gctgcggcaggagcacttagaaatctaaacaccaaagaaactgcaaaaaggaagcttaca
gcctacttctattctataccaactaataacctagattttgctactgaagaagatatgttg
gaatttctaaaagaacagggattattaattcatccttaccataaaaaagttcataatcta
gaagaaatgctagcagaacttgattttatagaggaagaaagaaaaaatatagatattcta
actgatggcgtagttattaagatcaatgataaaagaactcaagaagtcttaggctcaaca
aacaaatttcctcgttggtcaatagcttataaattcgaggcagaagaatataccacgaca
ttaagggaagttgtttggaatgtaggaagaagtggaaaagtaactcctagtgcaatacta
gatccagttgaattttctggggctacagtaagtcgagccaccctaaacaattatgatgat
attattaggaaaaaagtaagaatcggatctaaggtattcatcagaagatcgaatgatgta
atccctgaaatcctaggggttgtagatgagaatcaagaaggaacgaaagagatagaaaag
cctagcaaatgcccatattgcggcagcgagttaattcaaggcaatgtccacataatttgt
cctaattctatttcatgtaaaccacaacttcttgcgagaatggagcatttcacctcaaga
aatgcaatggatatagaaggactttctgaaaaaactatagcccaactaatggaagagtta
gatataaatgaagtagatgatatatatgatcttagctatgacgatttaatcaatttagat
agattcggagataagaaaacgaaaaatcttttaaatgccatagaagcaagtaaaaaggtt
gatcttgataattttatctatgcaataggaataccaaatgtaggtgaaagaacatctaga
gatttagccaacaagtttaagagttttgatgctttaagacacgctagccttgaagagctt
tcagatattgatgatataggtgaaattacagcacaaaatataatcgaatactttagagat
cctaatattagcaaatcgatcgataatttattgaaaaaaggtatagaaatatccgaagta
aaagcagataataatagtgatagcttaaatgacatgacttttgttattactggaactata
gataattataaaagagatgacataaagaaacttttggaaagtaacggagctaaggttact
ggatcagtttcaaagaatacggatgttgttttagctggtgaaaaatctggttcaaagaaa
gataaggctaagaatttaggaatagaaatttatgagaatgataaattatatgatttcttg
aaagaattggaaggaatgtaa
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