Abrus precatorius (Indian licorice): 113871215
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Entry
113871215 CDS
T07330
Name
(RefSeq) ABC transporter I family member 20 isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113871215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113871215
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113871215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
Arf
AAA_23
AAA
AAA_30
ORC-CDC6-like
ATP-synt_ab
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113871215
NCBI-ProteinID:
XP_027363952
UniProt:
A0A8B8M852
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MGVNSDSKAATIEIKDLRFTYPGIDGHPPPGSTSLIQDFSLTLYSGDRCLLVGSNGAGKT
TILKILGGKHMVEPHMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDV
SAEKMIFGVGGIDPERRAELIKVLDINLSWRLHKISDGQRRRVQICMGLLKPFKVLLLDE
ITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMD
KVKEISQLSLMRTVESWLRKERDEDKRKRKERKAAGLPEFVKHVEGSRVTGDPARAAVRA
INNGWAAGRLHSTVAGEENFLLSSNRVLRQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttaattcagattcaaaagcagcaacaattgagataaaggatctgagattcaca
taccctggcatcgacggccatcctccgccgggttccacttctctcattcaagatttctct
ctcactctctattccggcgaccgctgtcttctcgtcggttccaacggcgctgggaagacg
acaattctgaagatactaggagggaagcacatggtggagccacatatggttcgtgttctc
ggaagatcagcttttcatgacaccactttaacatcttctggtgatctctgttatcttggt
ggcgagtggaggcgagatgttgcttttgcaggttttgaggttccaatacaaatggacgtt
tctgctgaaaaaatgatatttggtgtaggtgggattgatcctgaaagaagagcagagctg
atcaaggtattagatatcaatctttcctggagattgcataaaatatctgatggtcaaaga
agaagagtgcaaatttgtatgggtctcctcaaaccatttaaagttcttcttctcgatgag
ataacggttgaccttgatgttctagcaagagctgaccttctgaggtttctaagaaaggaa
tgtgaagagagaggtgccactattatctatgcaacacatatatttgatggtcttgaggat
tggcccacgaatattgtttatgtagcccatggaaagcttcaactagcaatgcctatggac
aaagtcaaagaaattagtcaattgtccctaatgagaactgttgagagttggctgcggaaa
gaacgagatgaagataaaaggaaaaggaaagagaggaaagcagctggtcttcctgaattt
gtaaagcatgttgagggaagccgtgtaacaggggatccagcgcgggccgcggttcgagca
attaataatggctgggcagcaggacgattacattccaccgttgctggtgaagaaaacttt
ctcttgagctcaaaccgagtattgaggcagtag
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