Abrus precatorius (Indian licorice): 113871652
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Entry
113871652 CDS
T07330
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
113871652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113871652
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
113871652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_N
XRN_M
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
113871652
NCBI-ProteinID:
XP_027364553
UniProt:
A0A8B8M967
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MGVPAFYRWLADRYPLSIADVVEEEPCVGDDGVPLPIDVSKPNPNGMEFDNLYLDMNGII
HSCFHPDGKPAPATYGDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDASEAEAEAERLRKEFKGEGKVLSTKDKPETSDSNVITPGTEFMGALSVALQYFVQ
TRLSHNPSWQNTKVILSDSNAPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQQDKCFLCGQVGHFAADCQAKDCNPPDDSPIHKKKYQFLN
IWVLREYLQYELEIPNPPFEIEFERVVDDFVFLCFFVGNDFLPHMPTLEIREGATNLLIH
IYKKEFTAIGGYLTYAGEVFLDRVEQFFQFIIVHEDQIFQKRVRIQLAAENNEEMRARAR
GEMPGEPRASLVDKVKLAEPGYKERYYAEKFGVSNLEEIDKIKKDAVMTYVHSSILCFRT
RSGYNIMRLTFPVDKVISKKYTESSSGDPAQSTSEYPTTRDEYDVDIPAKVEERGVEGME
TPLEGRKGTRGSRGQGRLECRCSKLKEWNGLKESKSAVIKYLRKDAIRSQVPGAVAGPQL
GEAARRLVKSTLNIKLSSTSHGLLEKPLVHHTMNRPQSAGYRKYYGENTSGCYGQYNHRG
IITRPKHGVQNDRQNWRIQDRSQHQELFHNLKTEISASTMEEGGRPRSLRLPNSRPITNL
QTQFVQNKGPSMPPPKWVTKTPSMNGIYTRHQETALGEAGYDKQTKKVYQVKTCQPDTPE
FSNQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcgttttaccggtggctcgcggaccggtacccactctcgatcgccgac
gtagttgaggaagagccctgcgtcggcgacgacggtgttccgttgcctattgatgtgtct
aaaccaaatcccaatggcatggagttcgacaacttgtacttggacatgaatggtatcatt
cactcttgttttcaccccgatggcaagccagcacctgctacctatggcgatgtgttcaaa
tcaatatttgattacattgaccatctctattcgttggttcgtccaaggaagcttctctac
cttgcaattgatggagttgcaccaagagccaaaatgaatcagcaacgttctcgacgcttc
cgagctgcaaaagatgcatctgaggctgaagctgaagcagaaaggctgaggaaagaattt
aagggcgagggaaaagtgttgtcgactaaagataagcctgagacttcagactcaaatgtc
attacccctggaactgaatttatgggggcactgtctgtggctcttcagtattttgtacag
actagattgagccacaaccctagctggcagaatacaaaggttatactgtctgattcaaat
gcacctggtgagggagaacataaaataatggaatacatccggttacaacgcaacattcct
ggtttcaatccaaatactcgacattgtttgtatgggttggatgctgatttgattatgctc
tccttagctacgcatgaagttcatttctcaatattgagggaggtaattaccttacctgga
caacaggataagtgttttttgtgtggtcaagttggacattttgcagctgattgtcaagct
aaggactgtaatcctcctgatgatagcccaattcacaagaagaaatatcagtttcttaac
atctgggtgctgcgtgaatatttgcaatatgaattggagatacccaaccctcctttcgag
attgagtttgaacgcgtagtggatgattttgtatttctatgcttctttgttggcaatgac
tttcttccacatatgccaacattagagatccgggagggggctacaaatttattgatacat
atatacaaaaaggaatttactgcgataggtggttatcttacttatgcgggtgaggttttc
ttagatagagtcgaacaatttttccagtttatcattgttcatgaagatcaaatatttcag
aaacgagttcggattcagctggctgcagaaaataatgaagagatgagagctagggcaaga
ggagaaatgcctggagaaccacgagcctcacttgtggataaggttaaattagcggagcct
ggatacaaggaaaggtactatgctgaaaagtttggtgtatcaaatctggaggagattgat
aaaattaagaaagatgctgtaatgacatatgtccatagctcaatactctgcttccgcact
cgatcaggctacaacattatgcgtcttacttttccagtagacaaggttatctccaaaaaa
tatacagaatctagtagtggagatcctgctcaatctacatcagaatatcccacaactcga
gacgagtacgacgttgacatacctgcgaaggtggaggaaaggggtgttgaggggatggag
actcctctggagggcagaaaaggaactaggggcagtcgtggacagggaagactcgagtgt
agatgttctaagctcaaagaatggaatggactcaaagaaagtaaatcagcagtgataaaa
tacctgcgaaaagatgctatcaggtcacaagtacctggagcagttgctggacctcaactg
ggagaagcagctcgtcgacttgtcaagagcacactcaacattaaattgagtagtacatcc
catggattgttggaaaaacctctagttcatcatacaatgaataggcctcagtcagctgga
tacaggaaatattatggtgagaacacaagtggttgttatggacaatacaatcaccgtggt
ataataactagacccaaacatggtgtacagaatgatagacagaattggaggatacaagat
aggtcccaacatcaagaactgttccacaacttgaaaactgagatttctgcctcaacaatg
gaggaaggagggagacctaggtcattaaggcttccaaattccagaccaataaccaattta
caaacccagtttgtgcagaacaagggtccttcaatgccacctccaaagtgggtgactaaa
acaccatcaatgaatggaatatatactaggcatcaagaaactgcattgggggaagcaggt
tatgataagcagacgaagaaagtttaccaagttaaaacatgtcagccagatacaccagaa
ttttcaaatcaatag
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