Candidatus Absconditicoccus praedator: HLG78_04765
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Entry
HLG78_04765 CDS
T07729
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd01501
beta-Lactam resistance
aprd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HLG78_04765
01503 Cationic antimicrobial peptide (CAMP) resistance
HLG78_04765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aprd02000
]
HLG78_04765
01504 Antimicrobial resistance genes [BR:
aprd01504
]
HLG78_04765
Transporters [BR:
aprd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HLG78_04765
Antimicrobial resistance genes [BR:
aprd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HLG78_04765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6762
Motif
Other DBs
NCBI-ProteinID:
UFX83412
LinkDB
All DBs
Position
complement(994873..998193)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFGKFANFWIQNPKITAVVIICIVFAGFFSWYTIPKQYNPDIEVPAFQIMAEAPGYNSQQ
VKNLVTREMEQVFSQIEGVDDIQGTSMPHKAGVMVSFEVGMDQEVATTRLYNKIYSNLDL
SPYGVERPDVQPIDPDEIPIYTIAVYHEDKPLDDEENMLQLRKIGDQLVDEFKQIDGTTR
FYLNGAEKENINILFDIEKFHTRGVDMLQVIQTIKENNENQPGGTISYGDSLSQVKVSGE
YSSVEDIERLVVGEHEGAPVYLGDLARIYKGASPQTHYTFFADHKSSKDAVYLGIAKAPD
KNSIFLVDDIEEKIEKLEPTLPEGYHIQPVQDDGQTAQSATNMLLTNLFQAIIIVFLVLL
FYLGFRDALNNSIAIPLALGITFFVALSIGDNVNRITLFALILVLGMLVDNSTVVVENIS
RHLDERVKTGKNKLQAIKDAVDEVGFGVVLATITRILAFVAMFFVADMMGEYMGPIPQYA
IIALTASFFIAFSINPFIAYMLADNPRFDKKKESYKLKDVDKVADSGAHEVSTTKIEKWY
VNILEYFIGENKKLRRSSLKMIFWGALGLVVFVPIFLNIFKAQMLPKSDQDNFFVWIDMP
RDTSLDKSKQVAQHMSDFMRKFSPEVDNDKYPQQDLNIIKNTSYWVGLPPVPDFANTFRG
AAERQQQNQISSRVNILNKDNRDISSPEFVIKFRDLLTKHIKEKYPDAEIRVLEEPPGPP
VQATYKMKVSGQPGTSYQEINNLTNWMYQTTYDYLSKESVEDVYTTVQDYQTTYDVRINH
EKATRLGLSAEQIRNTVYNVFDGGKVGIYRDDSAREEIGLFVRADDEYADDINSFDDIRF
TSETGRKVPLKEVADIVPMESDDFKRTDQLRPTAYIYGEMGENSVVYPVIGLFVSFFNDD
FWGDAFEMTGWSPYGVEIQDKATGEKFQIDFGGEWEVTMDTFADLGVAMIIALMLIYFLM
VGQFKGFAIGGVIMITFLLGFFGVFPGFTMLYLLTGEYFSATSMIGVIALAGIVVGNAII
LIEYMNNLLARGWTLKSSIINAGKTRLRPIIITSLTTVLGITTILGDPVWSGLAWSIIFG
LSVSAILTLIIIPVFLYDNLIKSYNK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttttgaaaatttgcgaatttttggatacaaaatcctaaaataactgctgtggtaata
atctgtattgtttttgcctgatttttttcttggtatactataccaaaacagtacaatcca
gacatagaagtgccagcatttcagattatggcagaagcaccagggtataattctcaacaa
gtaaaaaatcttgttactcgtgaaatggaacaagtattttcacaaatagaatgagtagat
gatattcaatgaacttcaatgccacacaaagcatgagtaatggtaagttttgaggttggg
atggatcaagaagttgcaactacaagactttacaacaaaatatactccaatctagatctg
tctccatactgagtagaaagacctgatgtgcaaccaattgatccagatgaaattcctata
tacacaatagcagtttatcatgaagacaagccattagacgacgaggaaaatatgctacaa
cttaggaagatatgagaccagttggttgatgagttcaaacagattgattgaacaacaagg
ttttatctgaattgagcagaaaaagaaaatataaatatactttttgatatagaaaaattt
catacaagaggggttgatatgctacaagttattcaaactatcaaagaaaataatgaaaat
cagccttgatgaactatatcatacggtgatagtttgtctcaagtgaaggtgtcaggagag
tattcttcagtagaggatatagaaagacttgtagtttgagagcatgagtgagctcctgtg
tatcttggtgatcttgctagaatatataaatgagcatctccacaaactcattatactttt
tttgcagatcataaatcttccaaagatgcagtgtatcttggtatagcaaaagctccagat
aaaaattctattttcttggtggatgatatagaagaaaaaatagaaaaacttgaacctaca
cttccagaaggttaccatattcagccagtacaggacgactgacaaactgctcaaagtgcc
actaatatgcttttaactaatctttttcaggctattattatagtgtttttggttttgttg
ttttatctttgatttagagatgcattaaataatagtattgctataccattggcccttggt
attacattttttgttgccttaagtatatgagataatgtaaacagaataactctttttgct
ttgatacttgtattaggtatgttggtagataatagtactgttgtagtagaaaatatttct
aggcatttagatgaaagagttaaaacttgaaaaaataaactacaagcaatcaaagatgct
gtagatgaagtaggttttggagtggttttggctactattactagaattttggcgtttgtg
gcaatgttttttgtggctgatatgatgggagagtatatgtgacccatccctcaatatgca
ataatagcactgactgcttcgttttttatagcatttagtataaatccatttattgcctat
atgttggctgacaatccaagatttgataagaaaaaagaatcatacaagctaaaggatgtt
gataaagttgctgatagttgagctcatgaagtttcaacaacaaaaattgaaaaatggtat
gtaaacatacttgagtactttatatgagaaaacaaaaaacttagaagaagttctctaaaa
atgattttttggtgagctttgtgactggttgtttttgttccaatatttttgaatatattc
aaggctcaaatgctgcctaagtcagatcaggataatttctttgtttggatagatatgcca
agagatacatcgttggataaatcaaaacaagttgctcaacacatgtcagattttatgaga
aaattttctccagaagtggacaacgataaatatcctcagcaagatttgaatataattaaa
aacacatcttattgggtaggattgcctcctgttcctgattttgcaaatactttccgtggt
gcagcagaaaggcagcaacaaaatcaaatatctagtagagtaaatatactaaacaaagat
aatagagatataagttctccagaatttgtaataaaatttagagatttgcttacaaaacat
ataaaagaaaaatatccagatgctgaaattagagttttggaggaaccaccaggtccacct
gttcaagcaacttataaaatgaaggtgtcaggccaaccaggtacctcttatcaggaaata
aataatctaacaaattggatgtatcaaacaacttatgattatttatcaaaagaaagtgta
gaagatgtttatactactgttcaagattatcaaacaacttatgatgttagaataaatcat
gaaaaagcaaccagacttgggttgagtgcagaacaaataaggaatactgtttataatgta
tttgatggatgaaaggttggaatataccgtgatgattctgcaagagaagaaatatgattg
tttgtaagagcagatgatgaatatgctgatgatattaatagttttgatgatatcaggttt
acaagtgaaacttgaagaaaagtgccactgaaagaagtagcggatattgtgcctatggag
tctgatgatttcaaaagaacagatcagcttagaccaactgcatatatttattgagaaatg
tgagaaaattctgtggtgtatcctgtgataggattgtttgtttcatttttcaatgatgat
ttttggggagatgcatttgaaatgacttgatggagtccatattgagttgaaatacaggat
aaagcaactggagaaaaattccaaatagatttttgatgagagtgggaagttactatggat
acttttgcagatcttggtgttgctatgataatagctttaatgttgatatatttcttgatg
gtgggtcagttcaagtgatttgctatttgaggtgttataatgataactttccttttatga
ttttttggtgttttcccaggttttactatgttgtatttgcttacaggtgagtattttagt
gcaacttctatgatatgagtgatagcattggcaggtattgttgtttgaaatgcgattatt
ctgatagagtatatgaacaatcttttggcaagatgatggactttgaagtctagtataata
aatgcaggtaaaaccagacttagacctattattattacttctttgactacagttttgtga
attacaactattcttggagacccggtttggagtggtttggcttggtctataatatttggt
ttgtctgtgtctgctattttgactttgattattatacctgtatttttgtatgataattta
attaaatcctataacaaataa
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