Ahaetulla prasina (Asian vine snake): 131185726
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Entry
131185726 CDS
T09329
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131185726 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131185726 (KDM2B)
04121 Ubiquitin system [BR:
apri04121
]
131185726 (KDM2B)
03036 Chromosome and associated proteins [BR:
apri03036
]
131185726 (KDM2B)
Enzymes [BR:
apri01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
131185726 (KDM2B)
Transcription factors [BR:
apri03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
131185726 (KDM2B)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131185726 (KDM2B)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
131185726 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
131185726 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
AppA_SCHIC
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
131185726
NCBI-ProteinID:
XP_058014506
LinkDB
All DBs
Position
15:complement(17261581..17302455)
Genome browser
AA seq
1330 aa
AA seq
DB search
MEAERGSPRRLRCIGRRLYDENEDVSDVEEIVSVRGFDLDDKLRSRSYRGDFVRPMDGQD
FTFEYVQQEALKVPLIFRSKTGLGIKMPDSSFTAQDAKMLVGSRRIVDVVDVNTQKGVEM
SMAQFVRYYETPEAEREKLYNMISLEFSHTKLANIVKRPNVVDLVDWVDNMWPRHLKERQ
TESTNAISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLQNL
ELYEEWVVSGKQSDIFLGDRVELCQRIELKQGHTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQAKFRYPFYYEMCWYVLERYVFCLTQRSHFNREYLQESMLI
DTSRKRSLDSFSSDSWGDMDEDSCDVRAQEDKDNNPEKVPKISSDLPSSPNSTHSEGKET
LGRKPKSRFFKRTLSNESEESIKSATVDYSKTPTGSPATEVPAKWTHLTEFELKGLKALV
EKLESLPENKKCVPEGIEDPQALLEDMKNILKEHAEDDQNLAITGIPVVSWPKKNAKNRT
VGRPKGKLGPSSAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGR
MKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEESKFNLMLMECSICNEIIHPGCLK
VRESDGVVNEELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKVNRENK
EVVPEIPKRKVECEESPRKKSDERPPKPPLDPLLRRKSSEEAHLRRKRKFEKPQEPAMRK
RLKLGKEEKLFRKKRRSWKTPDDRVAALKPLRRFKQEGGEVFPEEPPKTKESDQSRSSSP
TAGPSSEGTESREKKKCKIRRKARLPNKELSKELSKELNQEIQKTENSLANEDHQPIKSE
PESESEEAKHHLGPEQPHPLTKGFNGTPRELRHQLLSSLRSSSTTPTPRTIARPPPSLSP
PKCMQMERHVVRPPPISPPPDSLLLDDGAAHVMQREVWMAVFRCLRPRELCVCMRVCRTW
NRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLITRLPGLR
DLLLAGCSWIAVSALCSSSCPLLRTLDSQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKL
RNITDLRLSGLDITDASLRLIIRHMPLLTKLNLSYCNHVTDQSINLLTAVGTTTRDSLTE
VVLKDCNKVTDQCLSYFKRCGSICLIDLRYCKQVSREGCEQFIAEMSVSVQFSQTEEKLL
KKLNVERTDWSAWERMTARLAVRCSGGTVRFLGFPCAGKETETPTQSCGQERVDQDFFAG
LRSETVVLRR
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaaagaggctcgcccaggagactgcgctgcatcggccggcggctctacgac
gagaacgaggacgtgtccgacgtggaggagatcgtcagcgtccgcggcttcgacctggac
gacaagctgaggagccgcagctaccgcggggacttcgtgcggcccatggacggccaagat
ttcacttttgaatacgtgcagcaggaagcgctaaaagtccctctcatcttccgaagtaag
actggactgggaattaagatgcctgactccagcttcactgcccaagatgctaagatgctt
gtggggagccgccgaatcgtggatgtggtggatgtcaacacccagaaaggcgttgagatg
agcatggctcaatttgtgcgctattacgaaacccccgaggcggagcgcgagaagctgtac
aacatgatcagcctggaattcagccacaccaaactagccaacattgtcaagcgtcccaat
gtggtggatttggtagactgggtggacaacatgtggccgcggcatttaaaggaaagacag
accgagtccacaaatgccatttcggagatgaaatatcccaaagtgaaaaagtactgcttg
atgagcgtgaaagggtgcttcaccgatttccacattgatttcggaggcacttcggtgtgg
tatcacgttttccggggaggaaagatcttttggctgattccgccaacgttgcagaaccta
gaactttatgaggaatgggttgtctctgggaagcagagtgacatttttctgggggaccgt
gtggagctgtgccaaagaattgagctgaaacaagggcacactttcttcattccttcaggg
tggatccatgcggtttacactccagtggattccttggtgtttggtggaaacatcttgcat
agctttaatgttcccatgcagcttcgcatttatgaaattgaggacagaacaagggtacaa
gccaagttccgctacccgttttactatgagatgtgttggtatgttttggagagatacgtg
ttctgtctaacccagcgctctcacttcaacagggagtatctacaagaatcaatgttaatt
gatacctcgaggaaacgtagcttggatagcttctcatccgattcctggggagacatggat
gaggactcgtgcgatgtgcgtgctcaggaagacaaggataacaatccggaaaaagtcccc
aagatctcgtctgacctcccctcttctcctaacagcacacactcggaggggaaagagacg
ttggggaggaagccaaaatctcggttcttcaaaaggactctgtccaacgagtcggaggaa
agtatcaaatcagccacggtggactattccaaaactcccaccgggtctcctgccaccgag
gtccccgccaaatggactcacttgaccgaatttgagctgaaaggtttgaaggccctggtg
gaaaaactggaatctcttccggagaacaagaaatgcgtccccgaaggcattgaagaccct
caagctctcctggaagacatgaagaatatcctgaaggaacatgcagaggatgaccagaat
ctggccatcactgggattcccgtggtatcctggcctaagaaaaatgccaagaaccggaca
gtcgggcgtccgaaggggaagctgggcccttcgtctgctgtgaagcttgcagcgaaccgg
acgacagcaggcgcgcgtcggagaaggacgcgatgtcgcaagtgcgaggcctgcttgcgg
acagagtgcggcgaatgtcatttctgcaaggacatgaagaagtttggggggcctggccgc
atgaaacagtcctgcattatgaggcagtgcatcgcgccggtgctaccccacaccgccgtt
tgtttggtatgcggagaagcagggaaggaagacacggtggaggaagaagagagcaaattt
aatctgatgcttatggagtgctccatctgcaatgaaatcatccatcccgggtgccttaag
gtgcgggaatcggacggcgtggtgaacgaggagcttccaaattgttgggaatgtcccaag
tgcaaccatgctgggaaaacggggaaagcgtacaagcaaaagcggggccctggtttcaaa
tatgcctccaacctgccaggctctttgctcaaagagcagaaggtcaaccgagagaacaag
gaagtcgtccccgagatccccaagcggaaagtcgagtgcgaggaatcaccccgcaagaaa
tccgacgagcggcccccgaagcccccactggatcctctcttgaggaggaagtcctcagag
gaagcccacctgcgccgcaagcggaaattcgagaaaccccaggagccggcgatgaggaaa
aggctaaaacttgggaaagaagagaagctgttcaggaaaaagaggcgctcctggaagacc
ccggatgaccgggtggccgccctcaaacccctgcggcgcttcaagcaagaaggaggggag
gtcttcccagaggaacctccgaaaaccaaggagagcgaccagtcgcgttcgagctcgccc
accgcggggcctagttcggaaggcaccgagtcccgggagaagaagaaatgcaagatccgt
cggaaagcccgcctgcccaacaaagaactgagcaaggaactgagcaaggagctcaaccag
gagatccagaagaccgagaacagcctggccaacgaggaccaccaacccatcaaatcggag
ccggagagcgagagcgaggaggccaagcaccacctcggcccggagcagccgcacccgctc
accaagggcttcaacgggacaccgcgggaactccgccaccagctcctctccagcctccgc
agcagcagcaccacccccacccccaggaccatcgcccggccccctccttccctctcgccc
cccaagtgcatgcagatggagcggcacgtggtacggccgccccccatcagtcccccgccc
gactcgctcctgctggacgacggagcggcccacgtgatgcagagggaggtgtggatggcc
gtcttccgctgcctccgacccagggaactctgcgtctgcatgagggtgtgccggacctgg
aatcggtggtgctgcgataaaaggctgtggaccaaaatagacctcaaccattgcaaatcc
atcacccccttgatgctgagtggcatcatcaggagacagccggttacgctagatttgagc
tggacaaatatctcgaaaaagcagctgagctggcttatcacccggcttccaggtctccgg
gatctgcttttggctggatgctcgtggattgctgtgtccgcactctgcagctccagttgt
cccctccttcgaactctggacagccaatgggtggaaggcctgaaggatgcccagatgcga
gacctcctgtcgccgccaactgacaaccggccaggccagatcgacaaccgaagcaagctg
cggaacatcaccgatctccgcctgtccggcttagacatcaccgatgcttctctgcgtctg
attatccgccacatgcctctcttgaccaaacttaatctcagctactgtaatcacgtgaca
gaccagtccatcaacttgttaacggcggtggggaccaccacgcgggactccctaaccgag
gttgttttgaaagactgcaacaaggtgacggatcagtgcctgtcgtacttcaagcgctgc
gggagcatctgtctcatcgacctccgttactgcaagcaggtcagcagggaaggctgcgag
cagttcatcgcggagatgtcggtcagcgtccagttcagccaaacggaagagaaattgctg
aagaagctgaatgtcgagagaacggactggagcgcgtgggaacgtatgacagccaggtta
gccgttcggtgctccggtgggaccgttcgcttcctgggatttccgtgtgccgggaaagaa
acggagacgccaactcagagctgcggccaagagcgcgtggaccaagacttttttgcgggc
ctccgaagcgaaacggtcgttctgcgccgctga
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integrated database retrieval system
