Ahaetulla prasina (Asian vine snake): 131198760
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Entry
131198760 CDS
T09329
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
131198760 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apri03400
]
131198760 (LIG4)
Enzymes [BR:
apri01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
131198760 (LIG4)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
131198760 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
DNA_ligase_IV
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
SSPI
Motif
Other DBs
NCBI-GeneID:
131198760
NCBI-ProteinID:
XP_058039764
LinkDB
All DBs
Position
1:182396355..182404856
Genome browser
AA seq
940 aa
AA seq
DB search
MLNTGLVGVGGVLNFLIPGFQVWWYKRKKASKMASVLTSHSSSELTVASQVPFGDLCSTL
ERIQKCKSRSDKTRYFKDFLDSWRKFHDALHKNEKDVVDSFYPAMRLILPQLERERMAYG
IKETVLAKLYIELLNLPKDGKDALKLLNFRTPTSSQGNVGDFAMIAYFVLKSRCINKGQL
TIQQVNDLLDSVSNNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTL
FSIFHPDAAELHSVTTDLEKVCRQLHNPSVSLSDASITLFSAFKPMLASIASVRQIEKQM
NNQTFYIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGASPLEGSLTPFIHQAFKNIQ
NCILDGEMMAYNPTTQTFMQKGSKFDIKRMVDDSELQTCFCVFDVLMVNDQKLGHEMLSK
RYNILNTIFTPIPGRVQIVSRIQANTQKEVVDALNEAIDNREEGIVIKDPISIYKPDKRG
EGWLKIKPEYVSGLMDELDLLIIGGYWGKGLRGGMISHFLCAVAETPLPGEKPSKFHSIC
RVGSGCTMKELYDLGLKLATYWKKYDRKVPPCNILCGVEKPQVYIDPCNSVIVQIKAAEI
VNSDMYKTECTLRFPRIERIREDKEWYECMTLDLLEQLRSKAAGKLATKHLDVVEDEPQE
KKRKTLAKIKKAIGLMDHFKAPDLSKINKVSNIFEDVEFCIMTGTQNYSKYALESKIAEY
GGSIVQNPGPDTYCVVAGTENVRVKNIISSNSYDVVRAEWLLQCFQAGKFVPWQPAFMIH
MSPETKQHFACEYDTYGDSFTADTDPLELKAVFSRINTSEEISQDVIADIEARYSWESSL
SMFRQQTIYLSLFDEMGNSRDRINQTRCLTVELILRFHGAKIVSQLEEGVSHVISGDHSD
LKKIKAIRRTFKKKFKIVSEQWIKDSVKAGELQNENLYVM
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacacaggtcttgtcggagtcggcggagttctaaattttctaatcccaggattt
caagtctggtggtataagagaaaaaaagcatctaaaatggcttcagtcctcacttcacat
tcatcttccgagctaactgtagcatcacaagtcccatttggagatctctgttcaacatta
gaacgaatacagaagtgcaaatcccgatcagataaaacaagatatttcaaggattttcta
gattcctggaggaaatttcatgatgctcttcataaaaatgagaaggatgtggtagattct
ttttatcctgcaatgaggcttattcttccacagttggaaagagagaggatggcttatgga
attaaagaaacagtgcttgctaagctctatattgagttgctaaatttacccaaagatgga
aaagatgctttaaaacttttaaattttcgaacacccactagctcacaaggaaatgttgga
gactttgctatgattgcctactttgttttaaaatcaagatgcatcaacaaaggccaactg
accatacaacaagtaaatgatcttctagattctgtttctaataataatgctgccaaaagg
aaggatctagttaagaagagccttcttcagttaataacccagagctcagcactagaacag
aagtggttgattaggatgatcataaaggatttgaaactaggtgtcagccaacaaacctta
ttttctattttccatcctgatgctgcagaattgcacagtgtcacaacagatttggaaaag
gtttgtaggcagctgcataatccttcggtatcacttagcgatgcttctattacattattt
tctgcctttaaaccaatgcttgcttctattgccagtgtgcgccaaattgagaaacaaatg
aataatcagactttttacatagagaccaaattagatggtgaacgaatgcagatgcacaaa
gatggagatgtttacaaatacttttccagaaatggatatgattatactcagcagtttggt
gcttctcccctcgaaggttcattgactcctttcattcatcaggcctttaaaaatattcaa
aactgcattctggatggtgaaatgatggcctataatcctaccacccagacttttatgcag
aaaggaagcaagtttgacatcaaaaggatggtggatgattctgaattacaaacatgcttc
tgtgtatttgatgttcttatggtcaatgaccaaaagttgggtcatgagatgctgagcaaa
agatacaatatattaaatacaatttttacaccaatacctggtcgagtacagattgtttct
agaattcaagcaaacacacagaaagaagtagtagatgccctaaacgaagccattgataac
agagaagaaggaattgtaataaaagaccccatatcaatttacaagccagataagcgtggg
gaaggatggctgaagatcaagccagaatatgtcagtgggttgatggatgaactggacctt
ttaattattggaggctactggggtaaaggtctccgtggtggcatgatatctcatttttta
tgtgcagttgctgagactcctttgcctggtgaaaaaccatctaaattccattccatttgt
cgtgttggttctggttgcactatgaaggaactgtatgatcttggcttgaaattagccaca
tattggaaaaaatatgataggaaggttccaccttgtaatatcttatgtggtgttgagaag
cctcaagtctatattgatccctgtaattccgtgattgttcagattaaagctgctgagatt
gtgaatagtgatatgtataaaacagaatgcacattacgttttccacgcattgaaagaata
agggaagataaagaatggtatgaatgtatgactcttgaccttctagaacaactcagaagt
aaagctgctgggaagcttgcaacaaaacaccttgatgtagttgaggatgaaccacaagaa
aagaagcgtaaaactctggcaaaaattaaaaaagcaattggtttaatggatcattttaaa
gcacccgatctttctaaaataaacaaagtttctaatatttttgaagatgttgagttttgt
attatgactgggacacaaaattattcaaagtatgccctggaaagcaaaatagcagaatat
ggtggcagcatagttcaaaatcctgggccagatacttactgtgttgtggcaggtactgag
aatgttagagtgaaaaatattatttcttccaacagttatgatgttgtgagagcagaatgg
cttttacaatgtttccaagctggaaagtttgtgccttggcagcctgcttttatgattcac
atgtctcctgaaacaaagcaacattttgcttgtgaatatgatacttatggtgatagtttc
acagctgatactgatccactagagttgaaggcagtgttctcaagaattaatacctctgaa
gagatttctcaggatgtgattgctgacatagaagcccgttattcttgggaaagttcccta
agtatgttcaggcaacaaaccatttacctgagtctttttgatgaaatgggcaattcaagg
gacagaataaatcaaaccagatgtttaactgtagagttgatacttcgctttcatggagca
aaaatagtgtcacagcttgaggaaggtgtatcccatgtaatcagtggagatcattctgat
ttgaagaaaataaaagccatcagaaggacatttaagaaaaagtttaaaattgtgtctgaa
caatggataaaggattctgttaaagctggagaattacaaaatgaaaacttgtacgtaatg
taa
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