Ahaetulla prasina (Asian vine snake): 131200031
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Entry
131200031 CDS
T09329
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04060
Cytokine-cytokine receptor interaction
apri04672
Intestinal immune network for IgA production
apri04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
131200031 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
131200031 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
131200031 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
apri04052
]
131200031 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
apri00536
]
131200031 (CXCL12)
Cytokines and neuropeptides [BR:
apri04052
]
Cytokines
Chemokines
131200031 (CXCL12)
Glycosaminoglycan binding proteins [BR:
apri00536
]
Heparan sulfate / Heparin
Chemokines
131200031 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
131200031
NCBI-ProteinID:
XP_058042328
LinkDB
All DBs
Position
5:139079815..139097631
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AA seq
109 aa
AA seq
DB search
MLASGRDPDCPGKSIFALEASSASALQRVPAGPSGFGKPISLTYRCPCRYFESQVAKSQI
KHLKILTVPGCPLQVIARLKNSSKQICIDSKLKWIQEYLEKYFQKRVKM
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatcaggcagagatcccgattgccctgggaagagcatcttcgctcttgaagcc
tccagcgcttctgctctgcagagggtccctgctggcccttctgggtttgggaaacccatc
agcctgacttaccgatgcccttgcaggtattttgagagccaagtggccaagtcccagatc
aaacacctgaagatcttgaccgtccctggatgcccccttcaggtcattgcaagactgaaa
aacagcagtaaacagatctgcattgactccaagttaaagtggattcaagagtacctggag
aaatactttcaaaagagagtcaagatgtaa
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