Auxenochlorella protothecoides: F751_0592
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Entry
F751_0592 CDS
T04132
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_0592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_0592
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
F751_0592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_29
AAA_25
AAA_23
ORC-CDC6-like
TsaE
nSTAND3
AAA_22
RsgA_GTPase
NACHT
AAA_28
AAA_30
AAA
DLIC
DUF3584
AAA_15
AAA_33
Arf
AAA_5
SRP54
AAA_14
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
23611983
NCBI-ProteinID:
XP_011398461
UniProt:
A0A087SIL1
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MDQPAVELRDLTFTYPTIDGQPRPGDQPIVRQLSLQLPRGSCTLLLGANGAGKTTLLRVL
AGKHMVDRAALQVMGEPPFHATHLTTSNRLSYIGGNWDQDVAFAGYSQPLRADISAGAML
ENVRGVGAARRAMLLEVMDINPAWRMHLVSDGQRRRVQIAMGLLHPFEVLLLDEVTVDLD
VLARSSLMAFLRRECRERQATVVYATHIFDGLDNWPTHILFLSQGQAKVFEQVENIAELK
SLRLMTWVVR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccagcagtcgagctgagggacctgaccttcacgtaccccactattgacggc
cagccccgcccaggcgaccagcccatcgtccgccagctctcgctgcagctccctcgcggg
tcatgcactctcctcctgggggccaacggtgcgggcaagaccacgctgctccgcgtcctg
gccggcaagcacatggtggaccgcgctgcgctgcaggtcatgggggagccgcccttccac
gccacgcacctcaccacctccaaccgcttatcctacatcgggggcaactgggaccaggac
gtggcgtttgccgggtacagccaacccctcagggccgacatcagcgccggcgccatgctg
gagaacgtgcggggcgtgggtgcggctcgccgcgcgatgctgttggaggtcatggacatc
aaccccgcctggcgcatgcacctggtgtccgacgggcagcgtcggcgtgtgcagatagcc
atgggcctccttcaccccttcgaggtcctcttgctcgatgaagtgacggtggacctggat
gttctggctcgctccagcctgatggctttcctgaggagggagtgcagggagaggcaggcg
accgtggtgtatgccacccacatctttgacgggctggacaactggccgacgcacatcctc
ttcctcagccagggccaggccaaggtgtttgagcaggttgaaaacatagcagagctgaag
agcttgcgtctcatgacgtgggtggtgaggtga
DBGET
integrated database retrieval system
