Auxenochlorella protothecoides: F751_5569
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Entry
F751_5569 CDS
T04132
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_5569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_5569
Spliceosome [BR:
apro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
F751_5569
Complex C
U5 SnRNP specific factors
F751_5569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFG_C
GTP_EFTU
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EFTUD2
WHD_AraR
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
23616960
NCBI-ProteinID:
XP_011395726
UniProt:
A0A087SAV6
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MDESLYDEFGNYVGPELSGSEASRGLLATPELCRNVTLAGHIHAGKTLLMDMLVEQTHVV
PDAAALADAPMRYTDTRADEQRRGISIKAAPVSLVVQGLSGKSYVASILDAPGHLDFGDE
LSVSLRLSDGMLLAVDRLITELKLPPADAYHKLRHVVEEVNALVRAHYPAEGAADRVLDP
RRGNVAFAAPLYGWSFTLESFAVLQSEFVLEPLYKIYATVLGEDDAAVRELMAELGVALR
PAAYGANVRPLLKEACTAVFGSAAGLVEVLVRSLPSARAGTATKVARWYTGPQDSEAAGH
MRACNPRGPLAVYVTKLFPTADATAFDLFGRVLSGTVKPGDKVRVLGEAYTPEDEEDAAT
ATVTGVWAAQGRARQPLARAVAGNWVLLGGLDATVAKTATLVPEFGAEEAYIFAPLTFGA
QAVVKIATEPLNPSELPKMVEGLRKLNKSYPMLVTKVEESGEHTIFGTGELYLDSVMKDL
REMYAEVEVKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIERGA
VSMDWTRKEISTFFQSKYDWDILAARSIWAFGPDKSGPNILMDDTLPSEVDKTLLNAVRE
SIVQGFQWGAREGPLCDEPLRNCKFKIMDAVVAPEPLHRGGGQVIPTARRACYSAFLMAT
PRLMEPVYAVEIQTPADCIAAIYNVLAKRRGHVTADVPRPGTPVFLVRAFLPVIESFGFE
TDLRYHTQGQAFCLSAFDHWQIVPGDPLDRSVVLRPLEPAPVQALARDFMVKTRRRKGMS
DDVSVNKYFDDPMLLELARQDAELNAMF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcgctctacgacgagtttggcaactacgtgggccccgagctgtccggcagc
gaggcgagcaggggcctgctggccacgccggagctgtgtcggaacgtgacgctggcgggg
cacatccacgctggcaagacgctgctgatggacatgctggtggagcagacgcacgtggtg
cccgacgcggcggcgctggccgacgcgccgatgcggtacaccgacacgcgcgccgacgag
cagcggcgcggcatctccatcaaggccgcgccggtgagcctggtggtgcagggcctgagc
gggaagtcctacgtggccagcatcctggacgcgcccggccacctcgactttggcgacgag
ctgtcggtctcgctgcgcctgtcggacggcatgctgctggcggtggaccgcctgatcact
gagctgaagctgccccccgcagacgcctaccacaagctgcgccacgtcgtggaggaggtg
aacgcgctggtccgcgcgcactaccccgccgagggcgccgcggaccgcgtcctggaccca
cgccgcggcaacgttgcctttgccgcgccgctctacggctggtccttcaccctggagtcc
tttgccgtgctgcagtccgagttcgtgctggagccgctgtacaagatctacgccaccgtg
ctgggcgaggacgacgcggcggtgagggagctgatggcggagctgggcgtggccctgcgc
cccgccgcctacggcgccaacgtccgcccgctcttgaaagaggcctgcaccgcggtgttc
ggctccgcggcggggctggtcgaagtgctggtgcgcagcctgccctccgcacgcgccggc
acggccaccaaggtcgcgcggtggtacacggggccccaggactcggaggctgcgggccac
atgcgcgcctgcaacccgcgcgggcctctggccgtctacgtcaccaagctgttccccacc
gccgatgccaccgcctttgacctcttcggtcgggtcctgagcggcaccgtcaagccgggg
gacaaggtgcgggtgctgggcgaggcgtacacgcccgaggacgaggaggacgccgccacg
gccacggtgacgggagtgtgggcggcccagggtcgtgcccgccagcccctggcccgcgcc
gtggctgggaactgggtgctgctgggggggctggacgccacggtggccaagaccgccacc
ctggtcccggagtttggcgccgaggaggcgtacatcttcgcaccactgacttttggcgcc
caggccgtggtgaaaattgccactgagccgctgaacccctccgagctcccaaagatggtg
gagggcctcaggaagctgaacaagagctacccgatgctggttaccaaggtggaggagagc
ggggagcacaccatcttcgggacgggggagctctacctggactccgtcatgaaggacctg
cgggagatgtacgcagaggtggaggtgaaggttgcggacccggtggtggccttctgcgag
accgtggtggagacctcctccctcaagtgcttcgcggagacgccaaacaagaagaacaag
atcacaatgatcgctgagccattggagaagggtctggcggaggacatcgagcggggcgcc
gtctccatggactggacgcgcaaggagatcagcacctttttccagtcgaaatacgactgg
gacatcctggctgcacgctccatctgggcctttggaccagacaaatcgggccccaacatc
ctgatggatgacacgctaccctcggaagtggacaagaccctgctgaacgcagtgcgagaa
agcattgtccagggcttccagtggggggcgcgggagggcccgctgtgcgacgagccgctg
cgcaactgcaagttcaagatcatggacgcggtggtggcgcccgagccgctacaccgcggc
ggcggccaggtcatccccaccgcgcgccgcgcctgctactccgccttcctcatggccacg
ccgcgcctgatggagccagtgtacgcggtggagatccagacccccgcagactgcatcgct
gccatctacaacgtgctggccaagcggcggggccacgtgaccgccgacgtgccgcgcccc
ggcacgcccgtcttcctggtccgcgccttcctcccggtcatagagtcctttgggttcgag
accgacctgcgctaccacacccagggccaggccttctgcctctccgccttcgaccactgg
cagatcgttcccggcgaccccctggaccgtagcgtggtgctgcgcccgctggagccggcg
ccagtgcaggccctggcacgcgacttcatggtgaaaacgcggcggcgcaagggcatgagc
gacgacgtgtcggtgaacaagtactttgacgatcccatgctcctcgagctggccaggcag
gacgcggagctgaacgccatgttctga
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