KEGG   Auxenochlorella protothecoides: F751_6626
Entry
F751_6626         CDS       T04132                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03420  Nucleotide excision repair
apro04120  Ubiquitin mediated proteolysis
apro04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    F751_6626
   04120 Ubiquitin mediated proteolysis
    F751_6626
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_6626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apro04121]
    F751_6626
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_6626
Enzymes [BR:apro01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     F751_6626
Ubiquitin system [BR:apro04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   F751_6626
  Multi subunit type E3
   SCF complex
    Ring finger protein
     F751_6626
   Cul2 complex
     F751_6626
   Cul3 complex
     F751_6626
   Cul4 complex
     F751_6626
   Cul7 complex
     F751_6626
   Cul8 complex
     F751_6626
   Cul9 complex
     F751_6626
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      F751_6626
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      F751_6626
SSDB
Motif
Pfam: zf-rbx1 zf-C3HC4_2 zf-RING_2 zf-ANAPC11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-RING_Vps41 Prok-RING_4 zf-RING_11 zf-Nse zf-RING-like zf-C3HC4_4 PHD_NSD zf-RING_4 zf_RING_Vps8 Rtf2 zinc_ribbon_16 zf-RING_10 zf-C3H2C3 zf_RING_Vps8_fungal Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 23618017
NCBI-ProteinID: XP_011399607
UniProt: A0A087SLR5
LinkDB
Position
Unknown
AA seq 124 aa
LQVDPTTVEEAEEKEKQVKPKSGEKRFVIKKWNAVAMWSWAICTDTCAICRNNLYEPSIE
YQANPSGDPDHPGLSIAWGSCGHVFHLDCIQRWLKTRSACPLCNKEWEFSKIEKILPGGT
AGTD
NT seq 375 nt   +upstreamnt  +downstreamnt
ctgcaggttgatcccacgacggtggaagaggcagaggagaaggagaagcaggtcaagcca
aagtccggcgagaaacgcttcgtcatcaagaaatggaacgcagtcgcaatgtggtcctgg
gccatctgcacggacacatgtgccatttgccggaataacctttacgagcctagcattgag
tatcaggccaatccctcaggtgaccctgaccaccctggcctgagcattgcgtggggatct
tgcgggcatgtcttccacctcgactgcatccagcgatggctcaaaacaaggagtgcatgc
ccgctctgcaataaagagtgggagttctcaaagatcgagaaaattctcccgggaggcact
gccggcacagactga

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