Augochlora pura: 144474196
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Entry
144474196 CDS
T11608
Symbol
Lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
apur Augochlora pura
Pathway
apur03018
RNA degradation
apur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144474196 (Lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
144474196 (Lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apur03019
]
144474196 (Lsm3)
03041 Spliceosome [BR:
apur03041
]
144474196 (Lsm3)
Messenger RNA biogenesis [BR:
apur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
144474196 (Lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
144474196 (Lsm3)
Spliceosome [BR:
apur03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
144474196 (Lsm3)
Complex C
U2 snRNP components
144474196 (Lsm3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
vATP-synt_E
TIG_SUH
DUF8043
Motif
Other DBs
NCBI-GeneID:
144474196
NCBI-ProteinID:
XP_078044966
LinkDB
All DBs
Position
8:complement(8813316..8814551)
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AA seq
103 aa
AA seq
DB search
MADEAEQVPAINVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETV
TTVEIDEETYEEVYRTTKRNISMLFVRGDGVILVSPPSMRAPL
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagcggagcaagtcccagcgataaatgttaaggaacctttagatcttata
agattgagtctcgatgaacgtatttatgttaaaatgagaaacgaaagggaactcagagga
agattacatgcttacgatcaacatttgaatatggtattgggagaagcagaagaaacggta
accacagtagagattgatgaagaaacatatgaagaggtttatcgtaccacaaaaaggaat
atatctatgttatttgtccgtggtgatggtgtaatattggtttctccacctagcatgaga
gcaccattataa
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