Augochlora pura: 144478746
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Entry
144478746 CDS
T11608
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
apur Augochlora pura
Pathway
apur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144478746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apur03041
]
144478746
Spliceosome [BR:
apur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
144478746
Complex C
U5 SnRNP specific factors
144478746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
144478746
NCBI-ProteinID:
XP_078053073
LinkDB
All DBs
Position
3:complement(15484455..15488315)
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AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASDSEDENEYGNAGDDADDRERSDEEMEEDKDESREQNDQGNS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPYLHSVTDEKPLRYTDTLFT
EQQRGVSTKAAPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
DNENPSFVSPAIGNVCFASSEYNVCFTLKSFAALYAKTHPGLNSNEFAKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVAHVPSPQSHAPVKVQHVYTGPIDSPLAQDMVNCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLNSSDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatctttatgacgaatttggcaattatatcggccccgatttggcctccgac
agcgaagacgaaaacgagtatgggaacgccggggacgatgccgacgacagggagcgctcc
gacgaggaaatggaggaagacaaagatgagtctagggagcaaaatgaccagggcaactcc
atggcagtggtgctgcacgaagacaaaagatattaccctagtgcattggaagtgtacgga
ccagaggtagaaacattagtacaagaagaggatgcccagccattagataaaccactgata
gcaccaactaggaagccaaagtttcagatcaagcagcaacaacttccagaaactacgtat
agtatagaattcttagcagacatgatggatgcaccccatttaattaggaatgttgttctg
cttggtcacttgcatcatggaaaaactactctagtcgattgtttagtgaggcaaacccac
ccctatctccacagtgtaacggacgaaaagcctttgaggtacacagacactctattcacg
gagcagcagcgaggagtatcaaccaaagcggcacctgtaactctattgttacaggacgtg
aagtcgaaatcttatctattaaacatatttgataccccgggccacgtgaacttttccgac
gaggcgacagccgcgatacgtttatctgacggcgcaatcctaatcgtggacgccgcagaa
ggtgtcatgttgaacacagagcggcttctgaagcacgcgcttcaagaaaagcttgcgtta
actgtctgtataaacaagatagaccgtttgatcttggagttaaaactgcctccgttagac
gcgtactacaaattacggcacattatcgaggagataaatggattgatcgccctctactcg
gataacgagaacccgtccttcgtatcgcctgcaattggcaacgtgtgttttgcaagctcc
gaatacaacgtctgtttcaccctgaaatccttcgccgccttgtacgcaaagactcatcca
gggttgaactccaacgagttcgcgaagagactatggggtgacatatactttaattccaag
actcggaagttcaccaagaaacctccgcacaataccgctcagcgtagcttcattgagttt
atcttggagccgctgtacaagatcttcgcccaggttgtcggcgacgtggacactaccttg
ccagatgtactagacgaactgggaatcagattgacttcagaggagatgaagatgaacatc
agacctttattgagattagtctgcaccaggtttctgggagacatgtgtggattggtcgac
atgtgcgtagctcacgtgcccagcccccaatctcacgcaccagtaaaggtgcagcacgtg
tacacaggacctatagactctcctctcgcacaggacatggttaactgtgatcccgatggc
aggttgatgattcacagcacgaaaatgtatcctaccgaagactgcacgctgttcgtagtc
ctcgggagggtgatgtccggtactttagaggcaggacaacgcgtccgcgtacttggtgaa
gcctattcccgcaccgatgaagaggactcgcgagttctcactgttggaaggttatggatc
agcgaggcacgctactctatcgaactaaacagggttccagcgggcaactgggttctgatc
gagggtatcgatcgaccaatagtgaagacgagcacgatcaccgatttgaacagctcggac
gacctccacatattccggccgctgaagttcaacacccagagcgtgatcaagatcgcagta
gagcctgtgaatccctcggaactgccaaagatgttggacggtctgagaaaggtgaacaaa
agctaccctctgttgggtactagggttgaggagagcggtgaacacgtggttctgggaaca
ggcgaactgtacttggactgcgccatgcatgatcttcgtcgcatgtactccgagatcgat
atcaaagtggccgatcctgtcgtcgccttcgctgaaacggtggtggagaccagttcgttg
aagtgtttcgcggagacaccgaacaagcgcaataaattgacgatgatcgctgaacctctg
gagagaggattggccgaggacatagaggcggagcacgttaaaatcacgtggaacaagaag
cggctgggagagttcttccagacgaagtacgattgggacttgctggctgcgagaagtata
tgggccttcggacccgacgccacaggcccgaacattctagtcgacgacacgctgccgtcg
gaagtggacaagacgctgctgaacagtgctcgggacgccatcattcaaggcttccaatgg
ggcaccagagaaggccccctttgcgaggagcctatccggaacgtgaagttcaagatcttg
gatgctgtgatcgcccaggagcctctgcatcgaggaggtggtcagatcattccaactgca
aggagagtagcctactcggcgttcttgatggcaacgcccagattaatggaaccgtacttg
ttcgtcgaggtgcaagcacccgcggattgcgtgtcggccgtttacacggtgctggccaaa
agaagaggccacgtcacccaagacgcccccgtgcctggaagtcctttgtacaccatcaag
gcgttcatcccagcgatcgatagcttcgggttcgagaccgatctcaggacgcacacacag
ggacaggcgttctgcttgtcggtattccaccattggcaaatcgtacctggcgatcccctg
gataaaagcatcacgattcgaccgctcgagcctcaaccggctacacatctggccagagaa
tttatgctgaaaacacggaggcggaagggtctgtccgaggacgtgtccattaacaaattc
ttcgacgatcctatgttgctcgagctggctaggcaggatgtacttttgaattatccacta
taa
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