Aspergillus puulaauensis: APUU_41560S
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Entry
APUU_41560S CDS
T08081
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
APUU_41560S
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_41560S
Enzymes [BR:
apuu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
APUU_41560S
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
APUU_41560S
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
64975121
NCBI-ProteinID:
XP_041557310
LinkDB
All DBs
Position
4:join(4007496..4008646,4008694..4010737)
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AA seq
1064 aa
AA seq
DB search
MGFKFTYLCNLLSSLEDNRVLKATTQARSRNPDVRVVSEWFARHGKRLRESDTNQLALLS
CMFPEKRTDRVYWLQDTNLARVIGRCLLLGSSRREELEKWRTSGGADLGQCVEDVMRQAE
NHIRADQEVTVEDIDEALNLIASRCRFSGPKVRRQRSAIDVEETLSPLYRRLSSRDAKWL
TRMILKSHFSSIIPERLTLKNFHFLLPHLLLFQNSFEAAVGLLSSQPISHFPHQPEPGLA
KDLGKIALYHLSPEIGIKIGRPDYYKARSVRHCCNMVGQRRMSVERKYDGEYCQVHIDFS
KHPSSIQIFSKSGKDSTVDRAGVHQAVRESLRMGKEGCRFKRRCILEGELLVWSDKHQKI
EHFHKLRKFVSRSGAFIGTESDSLPQPYEHLMIVFFDVLLLDDDICLRKPHRERRLLLKD
TIKLIPGLADIAEQRIIDFSRSDGHSKLEALFSMGIAERWEGFVLKGCEDSYFPILIDPG
DNCDGRWIKLKKDYIPGLGDTIDLALIGAAYNSRDASTLGLGKEVSWTHFFVGCLDNKDS
VLQSNAKPRVHVLDVIDHHCMSQPNMRMLNNFGKYSARSVDSDHGLDIEHVRPGMPRIDI
VFKTPFVVEMLGSGFEKPSGARYYTLRFPRILKIHSDRSIEDTASFRELQLLAEAAVSAP
AEDVLEQEAEWAKRVKMSTSRPGYLQDRSQSLSTEPSPILSRMGPITAIESEQAEPICCS
SLEALYQDGPTKRVSPQTETFAKTIPVYVDTRPTSSSSAGSPGPTGDVLASNENISQGNA
RKRKAVSPALEQHTKSIYQGSKKDDQSMGDNINPTLENTPVSACLGMAKKGRINDTNVGA
SDNTGQEVFGSVQSPLTRIPVFIHSEIVPKEQSTFNTFTNIAHTLEIFLLMLNQGDHESN
MQQPTVTAASQHPLSGIVFIDYGQYPLGETLLHLIKRISQAFAVSPFNHYPHPKGRLFLL
NSTFLQLDVNWKSNKLCLRKVWEKISRDYFYACIAWDKEARHGELINEVSSILLDDITSH
AHRGSPGTISRRNGKYSPKYRISFDRKELLDLGEFSSLDPLVRV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaagttcacctacctatgcaatctgctctcgtctctcgaggacaacagggtc
ctgaaagcaacgacccaggcgcggagtcgaaacccagatgttcgggttgtgtccgagtgg
tttgctcgccatggcaaacggctccgtgaatccgataccaatcagctagctttgctttca
tgcatgttcccggagaagcgaacggatcgagtatactggctacaggataccaatctggcg
agggttattggccgttgtttgctccttggatcttcccggcgcgaggagcttgaaaaatgg
cgcacatccggcggagcagacctcggtcaatgcgtggaggatgtgatgcgtcaggcagag
aaccatatcagggctgaccaagaagtcactgtggaggacattgatgaggcactgaaccta
atcgcatcccgatgtcggttctccggtccgaaagttcgaagacagcgctcagctattgac
gttgaggagacgctctcccctctttaccgtcgtcttagcagcagggatgccaaatggttg
actcgaatgatacttaaaagtcatttctcttctattataccagagaggctgaccttgaag
aattttcattttctgctacctcatttactactatttcagaattcgttcgaggctgccgtc
gggttgctgtcctctcagccaatctctcatttcccgcaccagcctgagcctggactcgca
aaggaccttggcaaaatagccttatatcatctcagtccagagatcggcatcaaaattgga
cggccggattactacaaggcacggagcgtcagacattgttgcaatatggttggacagcga
agaatgagtgttgagaggaagtatgatggcgaatattgccaggtacatatcgatttctcg
aagcatccaagttcgatccaaatcttctctaagagcggtaaagattctaccgtagacagg
gcgggcgtccatcaagcggtcagggagtccttgagaatgggcaaggaaggctgtagattc
aaacgccgttgcatcttagaaggtgagctgcttgtttggagcgacaagcatcagaaaatt
gagcattttcataaactacgcaaattcgtctcgcgatccggtgccttcattggcacagaa
agcgattctctaccacagccgtatgaacacttgatgattgtcttttttgacgtcctactc
ctcgacgatgacatttgtttacgcaaaccacaccgagaaagacgcctgctgctgaaggac
acgataaaattaattcccggtcttgccgatattgctgaacaacgtatcattgatttctcc
cgctcggatggtcacagcaaacttgaagctctcttctccatgggaattgctgagcggtgg
gaaggcttcgttctgaaaggttgcgaggactcatatttcccaattctaattgatccagga
gataactgtgacggccgctggatcaagctcaagaaggattacattccaggattgggtgac
acaatagatctggcattaataggtgcagcatataattcccgtgatgcttccaccctcggg
ttagggaaggaggtgtcgtggacgcacttttttgtgggctgccttgataacaaggactct
gtcctgcaatccaatgccaaacctagggttcatgttttagatgtgatcgatcaccattgc
atgagccagccaaatatgcggatgctgaacaatttcggcaagtatagcgcgcggagcgta
gactcggaccacggtcttgatatcgaacacgtacggccgggcatgccacgaatagatatc
gtgttcaagacaccgttcgtggttgagatgctggggagtggatttgagaagccgtctggc
gctcggtattataccctacgtttcccgaggattttgaaaattcactcagatcgttcaatc
gaagatactgcctcatttcgagagttgcagcttctagctgaagctgcggtatcagctccc
gcagaggatgtcctagagcaagaggcagagtgggccaagcgcgtcaaaatgagcacgtct
aggccaggttaccttcaagaccgatcacaaagtttatccactgaaccctccccgatctta
tccaggatgggccccattacggcgattgaatctgagcaagctgaacccatatgctgttcc
agcctggaagccttatatcaagatggcccaacgaaacgagtctctccacaaaccgaaacc
ttcgcaaagaccatccctgtatacgttgatactcgtccgacgtcaagttcgtcagccggg
tcaccgggacctacaggggacgtattagcgagcaacgagaacatatctcaaggaaatgct
agaaaacggaaagcagtatcaccagcattggaacaacataccaagagcatctaccaaggg
tcaaagaaggatgatcaatcaatgggtgataacattaacccaacactggagaacacgcct
gtctcggcatgtctgggaatggcaaaaaagggtcgaatcaacgacacgaacgttggggct
tctgataatacaggtcaggaggtgtttggatctgttcagtctcctctcactaggattcct
gtgttcatccattcagaaattgtgcccaaagagcagtcaactttcaatactttcacaaac
atcgcccatacactagaaatatttcttctcatgctaaaccaaggggaccacgaatctaat
atgcagcaaccaaccgtgactgctgcgtcccagcatcctctttcgggaatcgtattcata
gactatggccaataccccttaggcgaaaccctgctccacctcatcaaacgcatctcacaa
gccttcgccgtatctccattcaaccactacccccatcccaaagggcgactctttctcctc
aattcaaccttccttcagcttgatgttaactggaagagcaacaagctctgtctgcgcaag
gtctgggagaaaattagtcgagattatttctacgcttgtatagcctgggacaaagaagca
cgacatggggaactaatcaacgaagtttctagtattctgctggatgatatcacttctcat
gctcatcgaggttctcccggcacgatctcaagacggaatgggaaatattcccccaagtac
aggatatcatttgatcggaaggagctcttagatcttggggaatttagttcccttgatcct
ctggttcgtgtttag
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