Aquiluna borgnonia: HRU87_02550
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Entry
HRU87_02550 CDS
T06624
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aqg
Aquiluna borgnonia
Pathway
aqg03030
DNA replication
aqg03410
Base excision repair
aqg03420
Nucleotide excision repair
aqg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRU87_02550 (ligA)
03410 Base excision repair
HRU87_02550 (ligA)
03420 Nucleotide excision repair
HRU87_02550 (ligA)
03430 Mismatch repair
HRU87_02550 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqg03032
]
HRU87_02550 (ligA)
03400 DNA repair and recombination proteins [BR:
aqg03400
]
HRU87_02550 (ligA)
Enzymes [BR:
aqg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HRU87_02550 (ligA)
DNA replication proteins [BR:
aqg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRU87_02550 (ligA)
DNA repair and recombination proteins [BR:
aqg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HRU87_02550 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRU87_02550 (ligA)
MMR (mismatch excision repair)
DNA ligase
HRU87_02550 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HRU87_02550 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
HHH_3
RNA_lig_T4_1
BRCT_2
HalX
Motif
Other DBs
NCBI-ProteinID:
QKJ25098
UniProt:
A0A7D4ULI0
LinkDB
All DBs
Position
483326..485431
Genome browser
AA seq
701 aa
AA seq
DB search
MSSSIERLQELKELISKYRIAYYEQDETLVSDAEYDALERELKALEAQHPELAQASPTQA
VGSAASAVFSPVKHLEQMLSLDNAFDEQEFMAWALRVGGGPFLCEPKIDGLALSLTYENG
VLTKAATRGDGEVGEDVTANVLTIKTIPHRLAGKGHPKAIEIRGEVFLGKEDFDELNASI
VSEGGKPFANPRNCASGSLRQKDPSVSAARPLRMLVHGFGSWPGEIANQSEVYQLLSDWG
LPTTREFEVVEDAAAAYRFISQLQQRRGEIEHEIDGVVIKVDALERQRELGKTSRAPRWA
IAYKYPPEQVNTKLIDIKVSIGRTGRATPFAVLAPVLVAGSEVEFATLHNQEQVKAKGIL
IGDTVVLRKAGDVIPEILGPVATLRTGVETEFVMPTQCPECGSTLAPASEGDVDLRCPNS
RSCPAQLRERIAYIGSRSALDIEALGYVSATALTQPIEPAIPPVTSEADLFDLTLEKLLP
IRSYVLDPDTGLPKHDANGEPKTVSFFAKRDGSPAEAAIKLLDNLEQAKSKPLWRILVSL
SIRHVGPVAARALADHFGSAAGIFNASAQELAEVEGVGPTLAQSIIDWHTEDWHRQILQR
WEAAGVLLAIPGHEGPGSVSKDGIFSGLSIVITGSMVSLNREQAEARVIELGGKAASSVS
KKTSFVVAGPGAGSKLAKATELGIEVIDEAQFLARAGLDSN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctatcgagcgcctgcaggagctcaaagaactaatctccaaatatcgaatc
gcttactacgagcaggatgagactctggtctccgatgcggagtatgacgcgctcgagaga
gagctaaaagccctggaagctcagcatccggagctcgcccaggccagcccgactcaggcg
gttggctcggcagcatccgctgtattttccccggtgaagcacctggagcaaatgctcagc
ctggataacgccttcgacgagcaggagtttatggcctgggcacttcgagttggcggtgga
ccgtttctctgcgaaccaaagattgatggtttagccctttcactcacctatgagaatggc
gtgctaaccaaggctgccaccaggggagacggtgaggtcggtgaagatgtcacagcaaac
gtgctcaccataaaaaccattcctcaccggcttgctggcaagggtcaccccaaggcaata
gaaattcgcggcgaggtttttctgggaaaagaagactttgatgagctgaatgcttccata
gtttcggagggtggcaagccatttgccaacccgagaaactgcgcctcgggatccctgcgg
cagaaagatccgtcggtcagtgccgcaaggcctctgaggatgctggtgcacggctttggc
tcctggccgggagagattgccaatcaaagtgaggtttatcaactgctgagcgattggggg
ttgcccaccaccagagagttcgaagtggttgaggatgcagcggccgcctaccgattcatt
tctcagctccagcagcgccgcggtgaaattgaacacgagattgacggtgtggttattaag
gtagacgcgctcgaacggcagagagagctcggaaaaacctctagagcaccgcgctgggca
attgcctacaagtatccgcctgagcaggtgaacacaaaacttatcgatatcaaggtttca
attggcaggactgggcgcgccaccccgtttgcggtcttggcgcccgttttggtggcaggg
tcggaagttgagttcgccacccttcacaatcaagagcaggtgaaggccaaggggattttg
attggcgacaccgtggtgctgcgcaaggcaggcgatgtcattccggagatattgggtccg
gttgcaacccttcgcaccggagtcgaaaccgagttcgtcatgccaactcaatgcccagag
tgtggcagcacgctggcgccggcatccgagggtgatgtcgatctgcgctgcccaaattcc
aggtcttgcccggcccagctgcgcgagcgcatcgcctacatcggctctcgatctgcgctc
gacatcgaagccttgggttacgtgtcggctaccgctctgacgcagccgattgagccagcc
atcccaccggtcacctcagaggcggacctgtttgatttgaccctcgaaaagctattgcca
attcgctcctacgtgctggaccctgacacaggtcttccaaagcacgatgccaatggcgaa
ccaaagaccgttagtttttttgcaaagcgagatgggtccccagctgaagctgccatcaag
ctgctggataacttggagcaggcaaaatccaagccgctctggcgaatcttggtctcactt
tcgattcgccacgtcggaccggtggctgcgcgggcactggcggaccacttcgggtcggca
gctggaatttttaacgcttccgcgcaggagctggcagaagtcgagggtgttggaccgact
ctcgcgcagtcgatcatcgactggcatacagaggactggcacaggcaaatcttgcagcgc
tgggaagctgccggggtgctgctggcaataccaggccatgaaggacctggctcggtttca
aaggacggaatcttctctgggctctcgatagtgataaccggctcaatggtctcgctcaac
agggagcaggctgaggctcgggtgattgaacttggcggtaaggcggcttcttcggtatca
aagaagacatcttttgtggtggccgggccaggtgctggatccaagcttgccaaggccacg
gagctgggcatcgaggtaattgatgaagctcagttcttggcaagggccgggcttgattca
aactaa
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