Aquabacter sp. L1I39: J5J86_05825
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Entry
J5J86_05825 CDS
T10434
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi01501
beta-Lactam resistance
aqi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5J86_05825
01503 Cationic antimicrobial peptide (CAMP) resistance
J5J86_05825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aqi03036
]
J5J86_05825
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aqi02000
]
J5J86_05825
01504 Antimicrobial resistance genes [BR:
aqi01504
]
J5J86_05825
Chromosome and associated proteins [BR:
aqi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J5J86_05825
Transporters [BR:
aqi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J5J86_05825
Antimicrobial resistance genes [BR:
aqi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J5J86_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_CzcB
BSH_RND
BSH_CusB
BSH_YknX
Biotin_lipoyl
CzcB_C
HH_MFP_RND
Beta-barrel_AAEA
HH_EMRA
PYNP_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QTL04836
LinkDB
All DBs
Position
complement(1329616..1330803)
Genome browser
AA seq
395 aa
AA seq
DB search
MRRLASCLGLGLALTLAVTGPARADAQPAQGSKGLTVTVTRPQTRLMTETLLATGSLKAR
EEIQIGPEVEGYRLIELLADVGDRVEKGQVLARLSRDMLQVQLAQNTANGARAEAAIAQQ
RATLDQMLAQETEATSAVDRARQLRKTGVISQEALDERERAVKVAAAQVAATRQALLAAE
ADAKLVKAQRDEIELRMQRTEVRSPEAGVILTRDARVGSIVLSTRSDPLFRIAKNGAIDL
EAEVPEASMPRIAVGQRVEVTPAGFTKPVQGEVRLISAQLDKSTRLGNVEIALPENAQLR
PGTYARGLIEIGRREGLVVPQSAVLFDAKGAYVLVVTDGIVAERRVEPGLKDDGRVELVH
GVSASDQVVVRAGGFLREGDHVTPVEALQTAKDAR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcctcgcctcctgtctcggcctcggcctcgccctcacactcgccgtcaccggc
ccggcgcgcgcggatgcgcagccggcccagggcagcaagggcctgacggttaccgtgacc
cggccgcaaacccgcctcatgacggagaccctgctggccaccggctcgctcaaggcgcgc
gaggagatccagatcgggccggaagtggaaggctaccgactgatcgaactgctcgcggac
gtgggcgaccgggtcgagaaaggtcaggtgctcgcgcgcctctcgcgcgacatgctccag
gtgcagctcgcccagaacacggccaacggcgcgcgcgcggaagccgccatcgcccagcag
cgcgccaccctcgaccagatgctggcccaggagaccgaggccacgtcggcggtggatcgg
gcgcgccagttgcgcaagaccggcgtcatttcccaggaagccttggatgagcgcgagcgc
gccgtgaaggtcgccgccgcccaggtggccgccacccggcaggccctcctcgccgccgag
gcggatgctaagctcgtcaaggcccagcgggacgagatcgaactgcggatgcagcgcacc
gaggtgcgttcgcccgaagccggggtgatcctgacccgggatgcgcgcgtgggctccatc
gtgctgtccacgcggtccgacccccttttccgcatcgccaagaacggcgccatcgatctg
gaagcggaggtgccggaggcgtccatgccgcgcatcgccgttgggcagcgcgtggaggtc
acgcctgcgggctttaccaagcccgttcagggcgaagtgcgtctcatctcggcgcagctg
gacaagtccacgcgcctcggcaacgtggaaatcgcactgcccgagaacgcccagcttcgg
cccggcacctatgcgcgggggttgatcgagatcggccggcgtgaggggctcgtggtgccg
cagtcggccgtgctgttcgacgcgaagggcgcctatgtgctggtggtgaccgacggcatt
gtggccgagcgacgcgtcgaaccgggcctgaaggatgacggccgggtggaattggtgcac
ggcgtgagcgccagcgaccaggtggtggtgcgggccggcggcttcctgcgggagggcgac
catgtcacccccgtggaagccctgcagaccgcgaaggacgcccgctga
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