Aquabacter sp. L1I39: J5J86_16310
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Entry
J5J86_16310 CDS
T10434
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
aqi Aquabacter sp. L1I39
Pathway
aqi01501
beta-Lactam resistance
aqi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
aqi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5J86_16310
01503 Cationic antimicrobial peptide (CAMP) resistance
J5J86_16310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aqi02000
]
J5J86_16310
01504 Antimicrobial resistance genes [BR:
aqi01504
]
J5J86_16310
Transporters [BR:
aqi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J5J86_16310
Antimicrobial resistance genes [BR:
aqi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J5J86_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
HMA
Motif
Other DBs
NCBI-ProteinID:
QTL02350
LinkDB
All DBs
Position
3609654..3612770
Genome browser
AA seq
1038 aa
AA seq
DB search
MISKIFVDRPRLAMVIAIVMVIAGLVSLTRIPVAQFPDIVPPQVQVTARFPGASAEVVEA
TVAQPIEGQVNGVDNMIYMKSTSGDDGSYTLNVSFKVGTDPDQNATNVNNRVQLAIAMLP
EEVQRQGLSVRKQSSALLQVVGLWSDKAEHDTLFLSNYATINILDILRRIPGVGQANLFG
PQDYAMRIWFRTDRLAALDLTPQDVVAAIQSQNRIAPLGRIGAQPASTDTSYQLNIRTTG
RLSTPEEFSNIAVRANPDGSVLRVGDVARIELGAFNEDVETRLNGRSAQLIALYLSPGAN
ALGVAEEVNHAMADLARRFPAGMKQAITYDTTSFVEATIEVVEHTLVEAFVLVIIVVFIF
LGSLRATLIPLLAVPVSLVATFAVMLAMGYSANTVSLLAMVLAIGIVVDDAIVVVEAVEA
QMEADHHLTPAQATKKAMEGITAPIIAITLVLLSVFVPLAFIPGISGELFRQFAVVISVS
MLFSALNALTLSPALCALLLKPHQGERKGVMAWVSRRIDGVRDGYAAVVARLVRVAVLSL
VLIGAAGAGIYVLGGSTPSGFLPQEDQGAFFIEAKLPDAASLNRTREIVARVEDVVSKLP
GVQDVSVVSGYSMLSGLAESNSAFFIVTLKPFKDRTLGVNDLIARVARETAEVPALVIPF
NLPPIIGLGTGGGFEYQLQNLEGRPAAEMGEVMRALVFAANQNPALSEVYSTFRAQTPSV
FLNIDRDKAEVLGLSVSDIFAGLQAALGSAYVNDFNMFGRTWKVALQADALDRASIDDIY
RVQLRNRDGKMVPVQAVAEAEIAFAPSAVIRFNNVRSLTVNGAPAPGFSSSQALAAMEAV
SDKTLPNGYSYAWTGTAYQEKAASGQMGAILALAVLFAFLFLVGLYESWVIPVPVMLSVA
VALVGGIAAVGPAGLSIDLYAQIGIVVLIALAAKNGILIVEFAKARREEGVPIQEAAVQA
ARLRFRAVMMTSFAFILGLLPLVIAVGASEISRRSVSTPVFFGMIAASTVGILVIPMLYV
VFQSAREWVKTKGGKPAA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaagatcttcgtcgaccgcccccgcctggcgatggtcatcgccatcgtcatg
gtcattgcgggccttgtctcgctcacgcgcattccggtggcgcagtttcctgacattgtg
ccgccgcaggtgcaggtcaccgcgcgcttccccggcgcttccgccgaggtggtggaagcc
accgtcgcccagcccattgagggccaggtgaacggcgtggacaacatgatctacatgaag
tccaccagcggcgacgacgggtcctacacgctcaacgtctcgttcaaggtcggcaccgat
cccgaccagaacgccaccaatgtgaacaatcgcgtccagctcgccatcgccatgctgccg
gaagaggtccagcgacagggcctgagcgtgcgcaagcaatcctcggcgctgctccaggtg
gtggggctgtggtccgacaaggcggagcatgacacgctctttttgtccaactacgccacc
atcaacattctcgacatcctccggcgcattcccggtgtcggacaggccaatctgttcggg
ccgcaggactatgccatgcgcatctggttccgcaccgaccggctggcggcgctcgacctg
acgccccaggacgtggtggcggccatccagagccagaaccgcatcgccccgctcgggcgc
atcggcgcccagccggccagcaccgacacctcctaccagttgaacatccgcaccaccggc
cgcctctccacgcccgaggagttttccaacatcgccgtgcgcgcgaatcccgacggctcg
gtgctgcgggtgggcgatgtggcgcggatcgagcttggcgccttcaacgaggatgtggag
acgcgcctcaatggccgctcggcgcagctcatcgcgctctacctctcccccggcgccaat
gcgctgggcgtggcggaggaggtgaaccacgccatggcggaccttgcccggcgttttccg
gcgggcatgaagcaggccatcacctatgacaccaccagcttcgtggaggccaccatcgag
gtggtggaacacacgctggtggaagcctttgtgctggtcatcatcgtggtgttcatcttc
ctcggctcgctgcgcgccactttgatcccgctgctggcggtgccggtaagcctggtggcc
accttcgcggtcatgctggccatgggctattcggccaataccgtgtcactgctggccatg
gtgctggccatcggcatcgtggtggacgacgccatcgtggtggtggaggcggtggaggcc
cagatggaggccgaccaccatctcacgcccgcgcaggccaccaagaaggcgatggagggc
atcactgcgcccatcatcgccatcacgctcgtgctcctgtctgtgttcgtgccgctggcc
ttcattcccggcatttccggcgagctgttccggcagttcgcggtggtcatcagcgtgtcc
atgctgttctcggcgctgaacgcgctgacgctctcgccggctctgtgcgcgctgctgctg
aagccgcaccagggcgagcgcaagggcgtgatggcctgggtcagccgccgcatcgacggc
gtgcgcgacggctatgcggccgtcgtcgcccggctcgtgcgggtggcggtgctctcgctg
gtgctgatcggggcggcgggcgcgggcatctatgtgctgggcggcagcaccccctccggc
ttcctgccccaggaagaccaaggcgccttcttcattgaggccaagctccccgatgccgca
tccctcaaccgcacccgcgagatcgtggcgcgggtggaagacgtggtctccaagctgccg
ggcgtgcaggacgtgtcggtggtttcaggctattccatgctgtcggggctcgcggaatcc
aacagcgccttcttcatcgtgacgctgaagcccttcaaggaccgcacgctcggcgtcaac
gacctcatcgcccgcgtggcgcgggagacggcggaggtgccggccctcgtcattcccttc
aacctgccgcccattatcggcctcggcaccggcggcgggttcgagtaccagctgcagaat
ctggagggccgtcccgcggccgagatgggcgaggtgatgcgggccctcgtcttcgccgcc
aaccagaaccccgccttgagcgaggtctattccaccttccgcgcgcagacgccctcggtg
ttcctgaacatcgaccgcgacaaggcggaagtgctgggcctgtcggtcagcgacatcttc
gccggcctccaggctgcgctcggcagcgcctatgtgaacgacttcaacatgttcggccgc
acctggaaggtggccctccaggccgatgccctcgatcgcgccagcatcgacgacatctac
cgcgtccagctgcgcaatcgcgatggcaagatggtgcccgtgcaggcggtggccgaggcg
gagatcgcgttcgcgccctcggccgtcatccgcttcaacaatgtgcgcagtctcaccgtg
aacggcgcgccggcgccgggcttcagctcgtcccaggcgctggccgccatggaggcggtg
agcgacaagaccttgcccaatggctacagctatgcctggaccggcaccgcctatcaggaa
aaggcggccagcggccagatgggcgccatcctcgctttggcggtgctgttcgccttcctg
ttcctggtggggctctatgagagctgggtcatccccgttccggtgatgctgtcggttgcg
gtggcgctggtgggcggcatcgcggcggtggggccggcgggcctgtccatcgacctttat
gcccagatcggcatcgtcgtgctgatcgcgctggcggccaagaacggcatcctcatcgtc
gaattcgccaaggcccggcgggaggagggggtgccgatccaggaggcggccgtccaggca
gcgcgcctgcggttccgcgcggtgatgatgacgtccttcgctttcatcctcggcctgctg
ccgctggtgatcgccgtcggcgcctcggagatcagccggcgctcggtctcgacgccggtc
ttcttcgggatgatcgcggcctccaccgtgggcatcctggtgatccccatgctctatgtg
gtgttccagtccgcccgcgaatgggtgaagaccaaaggcggcaagccggcggcctga
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