Ascochyta rabiei: EKO05_0002372
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Entry
EKO05_0002372 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0002372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0002372
Spliceosome [BR:
arab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EKO05_0002372
Complex C
U5 SnRNP specific factors
EKO05_0002372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Ras
Motif
Other DBs
NCBI-GeneID:
62220287
NCBI-ProteinID:
XP_038793044
LinkDB
All DBs
Position
3:complement(join(2355185..2355430,2355488..2358209,2358260..2358279))
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AA seq
995 aa
AA seq
DB search
MDDLYDEFGNFIGEAESDEEVQTNGEAADAYVLDDDEPEDAEVNDQQLMEIDEGPSNAVV
LHEDKQYYPSAADVYGDDVEVLVQEEDTQSLAQPIIAPIVQKKFTVQETDLPPVHYSREL
LTDLMNFPDQIRNIAIAGHLHHGKTAFMDMLVMETHDIQDRLDYKKGKKREEQLRYTDVH
ILERERGLSIKAAPMSLVLQNTKSKSHLFNILDTPGHVNFADEVASSLRLVDGVVLVVDV
VEGVQVNTEQIIKHAVLEDLPLTLVINKMDRLILELKLPPKDAYFKIKHVIEEVNTVIEN
TIPGRGESRRVSPEKGNVAFACTSMRWCFTIQSFAKMYSDFYPGPSRLPGFGVPMKGLDV
DKFAMRLWGDIFYNPGSRKFSRKAQEEGAQRSFVHWILEPVYKLYSHTLSESSADLKDTL
NSLGINLKPSEYKTDAKELMRLVCQQYFGPSSGFVDMITQHVPSPAEGAKRLLQRHYTGP
LDSKTAEAMEKCDQDGPLVVHVTKLFNATDAKSFTALGRVMSGIAKSPQSVRVLGEGYTI
EDEEDMVVATITDTWIAESRYNVPVSGVPAGNWVLLGGVDNSIVKTATIVASKLPDDEEA
YIFRPIRHFFESVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVVLGTGE
LYMDCVLHDLRRLYADMEIKVSDPVTRFCETVVEMSAIKCYAMTPNKKNKLTMIAEPLDP
GIAEDIEAGKVNIKDPVRVVGKFFEENYGYDLLASRNIWAFGPDDMSANILQNDTIPSEV
DAKTLRTVRDTLRQGFSWATREGPLCEEPIRNTKFRITDVELASEAIFRGGGQIIPTSRR
ACYSSFLMASPRLMEPVYSCSMTGPADTKSSLYTVLARRRGHVLQDGPIAGTPLYNVRGL
IPVIDSFGFETDLRIHTQGQVSLSLVFDRWSIVPGDPLDKEIKLRPLEPATAQALARDFV
LKTRRRKGLAEDVTISKFLEPELFRSLKESGVLDG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctttacgacgagtttggtaactttattggggaggccgagtccgatgaagaa
gtccagacgaacggagaggcggcggacgcctatgtcctcgatgatgacgagcccgaggac
gctgaggtgaacgaccagcagcttatggagattgatgagggcccatcgaatgccgttgtt
ctccacgaggacaagcaatactacccctcggcggccgacgtttacggcgacgatgtcgaa
gttttggtgcaggaggaggacacacagtcgctggcgcagcccatcattgcgccaatcgtg
cagaagaagttcacagtgcaggagacagacctgccgcctgtgcactattcgagggagctt
ttgaccgacttgatgaacttcccggaccaaatacgaaacattgcgattgccggtcacttg
catcacggaaagactgcgttcatggacatgctagttatggagacacacgacatccaggat
cgactggactacaagaagggcaagaagagggaggagcaattgcgatacacagatgtacac
attctcgagcgcgaacgaggcctgtcgatcaaagcggcgccaatgagtctggtcttacag
aacaccaagtcgaagtcgcatcttttcaacattctggacacacccgggcacgtcaacttt
gcagatgaggttgcttcttctttgcgcctggttgacggagtcgtcttggttgtggacgtt
gtggaaggtgtccaggtcaacacggagcagatcatcaagcatgcggtgctggaagatctc
cccctgacactcgtgatcaacaagatggaccgcctgattttggagctcaagctcccacca
aaggacgcctactttaagatcaagcatgttattgaggaggtcaacacagtgattgagaac
acaatccccggacgcggagagagcagacgggtcagccctgagaagggcaacgtcgcattc
gcgtgcacaagcatgcggtggtgcttcaccatccagtctttcgcaaagatgtactcagac
ttctacccgggaccctcgagattgccgggctttggagtgccgatgaagggcttggatgtc
gacaagttcgccatgcgactctggggtgatatcttctacaacccgggcagccgcaagttc
agccgcaaagcacaggaggagggcgcacagcggtcattcgtacattggattctggaaccg
gtctacaagctctactcccacactcttagtgagagctcagccgatctcaaggacactctc
aactccctgggtatcaacttgaagccgtccgagtacaagaccgatgcaaaggagcttatg
cgactggtctgccagcagtactttgggccatcctcaggtttcgtcgacatgatcactcag
catgttccgtcaccggccgaaggtgcgaagagattgctccaaagacactacaccggaccc
ctggactcgaagactgctgaagccatggagaagtgtgaccaggatggccctctcgtcgta
catgtcacaaagctatttaacgctacggatgcaaagtctttcacagcgctgggacgagtc
atgagcggtattgcaaaatctccccagtcggtgcgcgttcttggtgaaggctacacgatc
gaagacgaggaagacatggtcgttgcaaccatcacagacacgtggattgccgaatcaaga
tacaacgtacccgttagcggtgtgccggcaggaaactgggtgctccttggtggtgtcgac
aactcgatcgttaagacagcgacgatcgtcgcttcgaagctgcctgacgatgaagaagcg
tacatcttccgacccatccgacacttctttgaatctgttttcaaggtggcggtggagcct
atcaatccctctgagttacccaagatgctggacggtctccgcaagatcaacaagtcgtac
cctctcattactaccaaggttgaagagtcaggagaacacgtcgttctcggcacgggcgag
ctgtacatggactgcgttctgcacgacctgcggcgactatacgctgacatggagataaag
gtgtcggatcctgtgaccaggttctgtgagaccgttgtcgaaatgtctgcgatcaagtgc
tatgccatgacaccaaacaagaagaacaagctcaccatgattgctgagccgctagaccct
ggtatcgctgaagacatcgaagctggcaaggtcaacatcaaggatcctgtccgtgtagtc
ggcaagttcttcgaagagaactacggctacgacctgctcgcatcgcgcaacatctgggca
tttggtccggacgacatgagtgctaacatcctgcaaaacgacactataccctcggaagtc
gacgcaaaaacactgcgcacagtccgcgacacgttacggcagggtttcagctgggcgacg
cgcgaaggaccgctctgtgaagagccaattcgcaataccaaattccgcatcacggacgtc
gagcttgcgtctgaagccatcttccggggtggcggtcagatcatccctaccagtcggcga
gcctgctactcgagcttcctcatggccagtccgaggttgatggagccggtatactcctgt
agcatgactggtcctgcagacactaagagcagtctatacacagtgctcgccaggagaaga
ggacacgtgctgcaggatgggccaattgctgggacaccgctgtacaatgttcggggtctc
attccggtcatcgactcttttggtttcgagactgatctgaggatccatactcaaggccaa
gtatccctgtccctcgtctttgaccgctggtccatcgtgcctggcgacccactcgataag
gagatcaagctgcgacccctcgagcctgcaaccgcacaggcacttgcccgagacttcgtc
ctcaagacaagaagaagaaagggtttggccgaggatgttacaattagcaagttcctcgaa
ccagagctcttcaggagcctgaaggagagcggcgtactcgacggttag
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