Ascochyta rabiei: EKO05_0003814
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Entry
EKO05_0003814 CDS
T09445
Name
(RefSeq) Thymine-DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
arab
Ascochyta rabiei
Pathway
arab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKO05_0003814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0003814
Enzymes [BR:
arab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
EKO05_0003814
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKO05_0003814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
62212109
NCBI-ProteinID:
XP_038800463
LinkDB
All DBs
Position
5:complement(2020999..2021970)
Genome browser
AA seq
323 aa
AA seq
DB search
MRSAARTNVLVKLEEPSSDLSDPPELLPSPPSTSFKSYLAKYQYANGSTKENDAPMLTSP
RATTKRPRTTTVTTKAISPTAASSSLSPRPRKKQRKSSKYADPSKYAHLSPLVDILEPGL
IGVFVGTNPGVSTALHGHAYAHPSNHFWKLLHSSGLTDRRLAPSEDRSLPTKYCVGNTNI
VSRPSKDAAELSKDEMSEGTRELERKFAAFRPEAVCIVGKGIWEAIWRFKYSRNMKKEEF
RYGWQDEKHNMGRVEGEAEWVGSKVFVTTSTSGLAASLKPAEKEAIWRPFGQWVQQRREE
RNFVPGLTEEAVVKEEVKEEEER
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccgccgcgcgaacaaatgttcttgtaaagctagaggaaccctcaagcgatctt
tcggacccccctgaactgctgccatcaccgccgtctacatccttcaaaagttatttagcg
aagtaccaatacgcaaatggctcaacgaaggagaacgatgcacccatgcttacatcacct
cgagcgacaacaaagcgtccacgcactaccacggtcaccaccaaggcaatatcaccaaca
gcagcctcatcatcgttgtcacctcgccctcgcaaaaagcagcggaaatctagcaagtat
gcggatccctctaaatatgctcacctgtccccgctggtcgatatcctagaaccaggcctg
ataggcgttttcgtcggcaccaatcccggtgtcagcactgctttgcatggacacgcatac
gcacacccatcgaaccatttctggaagcttctgcactcctcaggccttacggatcggcga
ttggcgcctagcgaagacagaagcctgccgacgaagtactgtgtgggcaacacgaatatc
gtaagcaggccgtccaaggatgcggcggagttgagcaaggatgagatgagcgagggcacg
agagagctggagaggaagtttgcagcgttcaggcctgaggcggtgtgcattgtgggcaag
gggatttgggaggcgatttggcgattcaagtatagcaggaacatgaagaaggaggaattc
aggtacgggtggcaggacgagaagcataacatgggaagagtggagggagaggcggaatgg
gttgggagcaaggtgttcgtcacgacaagtacaagtgggttggcggcaagtctgaagccg
gcggaaaaggaagcgatctggagaccgtttggacagtgggtgcaacagcggcgggaggag
aggaacttcgtccctggcctgacagaggaggctgttgtcaaggaagaagtaaaagaagaa
gaggaacgatga
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