Ascochyta rabiei: EKO05_0008263
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Entry
EKO05_0008263 CDS
T09445
Name
(RefSeq) Small nuclear ribonucleoprotein-associated protein B
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0008263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0008263
03041 Spliceosome [BR:
arab03041
]
EKO05_0008263
03032 DNA replication proteins [BR:
arab03032
]
EKO05_0008263
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
EKO05_0008263
Spliceosome [BR:
arab03041
]
Complex A
U1 snRNP components
Sm proteins
EKO05_0008263
U2 snRNP components
EKO05_0008263
Complex B
U1 snRNP components
EKO05_0008263
U4/U6.U5 tri-snRNP components
EKO05_0008263
Complex C
U2 snRNP components
EKO05_0008263
DNA replication proteins [BR:
arab03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
EKO05_0008263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Eap1
Motif
Other DBs
NCBI-GeneID:
62216471
NCBI-ProteinID:
XP_059493237
LinkDB
All DBs
Position
14:complement(join(946059..946168,946220..946637,946687..946758,946809..946817,946902..946931))
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AA seq
212 aa
AA seq
DB search
MAAANRQGKMQNLINYRMKVTLQDGRQMVGQMLAFDKHMNLVLADTEEFRRTRRRGKAAP
GATQQVTETEERRAIGLTIIRGAHVISLSVDGPPPADPAARLGAAASGPSTAAALAAGPG
VARPAGRGLPVGLTGPAAGVGGPGAGFGAPPFAGGPPGFAGPPPGFGGRGGPPGGPPGFP
PAGGPPGFGGPPGFGGPPGFQGRGGPPGFGGR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccaacagacagggcaagatgcaaaacctaatcaactaccgcatgaaggtg
acacttcaagacggcaggcagatggtcgggcagatgctcgcattcgacaagcacatgaac
ctcgtcctcgccgacacggaggagttccgccgcacacgacgaaggggaaaggccgcgccg
ggcgcaacccagcaggtcaccgaaaccgaggagcgacgtgccattggcctcaccatcatt
cgcggcgcgcacgtcatctcgctgtccgtagatggaccaccgcccgccgaccctgccgca
cgactgggagctgccgctagtggaccctcgacggctgcggcgctggctgctggacctggt
gttgcgcgaccggcaggacgtggactgcccgtcggtctcactggacctgctgctggtgta
ggaggacccggtgctgggttcggtgcaccgcccttcgctggcggcccaccaggattcgca
ggaccgcctcctggctttggcggtcgtggtggtcccccgggtggacctcctggcttccca
cctgctggcggacctcctggctttggtggtccccctggctttggtggaccacctggtttc
caggggcgcggtggccctccaggtttcggcggacgatag
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integrated database retrieval system
