Arthrobacter sp. ERGS1 01: AL755_06580
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Entry
AL755_06580 CDS
T04085
Name
(GenBank) aromatic ring-opening dioxygenase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
are
Arthrobacter sp. ERGS1:01
Pathway
are03030
DNA replication
are03410
Base excision repair
are03420
Nucleotide excision repair
are03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
are00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL755_06580
03410 Base excision repair
AL755_06580
03420 Nucleotide excision repair
AL755_06580
03430 Mismatch repair
AL755_06580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
are03032
]
AL755_06580
03400 DNA repair and recombination proteins [BR:
are03400
]
AL755_06580
Enzymes [BR:
are01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AL755_06580
DNA replication proteins [BR:
are03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL755_06580
DNA repair and recombination proteins [BR:
are03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AL755_06580
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL755_06580
MMR (mismatch excision repair)
DNA ligase
AL755_06580
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AL755_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
BRCT_2
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
ALE05219
UniProt:
A0A0M4LJU6
LinkDB
All DBs
Position
599578..601857
Genome browser
AA seq
759 aa
AA seq
DB search
MTSQQDANEPDPDTIIPEGPVPADADRERYAEVVELVQKYRAAYYNDDAPLASDAEFDAL
YSDLEKLEALHPELVTNDSPTQVVGGDVSVAFAAVDHLSRMYSLEDVFSLEELEAWLRKA
EGSVEKQHGLAPKWLTELKIDGLAVNLLYRDGVLVRAATRGDGTTGEDITHNVATIKDIP
QRLHGSNFPAEVEIRGEVFIASADFAALNEKMVAAGKAPFANPRNSAAGSLRQKDPAETA
KRPLSMYVHGIGAREGLETTSQSETYALLHEWGMPTSPYYKVLDTLEEVLDFIAHYGEHR
HDLIHEIDGIVVKVDDFATQRALGNTSRVPRWAVAYKYPPEEVHTKLLDIKVQVGRTGRV
TPFGIMEPVKVAGSTVERATLHNQDVVKAKGVLIGDIVVLRKAGDVIPEIVGPVMALREG
REAELREFVMPAECPSCGTTLAPAKEGDIDIRCPNAKSCPIQLTERVAHLAGRGGFDIEA
LGYEAAAALTSGPGPDPTENGGVIAPAGPGPLTSEADVFTIAELDLSEVVVWREIRSKGE
GTGRFQQVPYFYTKATAKKPSVPTKTTEKLYEELEKAKAQPLWRVLVALSIRHVGPTASR
ALATAFGSMDGIRAASEEALAGVDGVGPIIAEALIEWFGVDWHRDIVDAWAAAGVRMADE
VDESTPRTLEGLTIVVTGTLPNFSRDEAKEAIITRGGKASGSVSKNTSYVVAGENAGTKL
DKAESLGLKVLDEEGFVRLLADGPAAETDIETIDEGEPA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgactagccagcaagatgccaacgagcccgaccccgacaccatcattccggagggcccc
gtcccggcggacgccgaccgcgaacggtacgccgaagtggtggagctggtccaaaaatac
cgggccgcctattacaacgacgacgccccgctggcctccgacgccgaattcgacgcgctc
tacagcgatctggagaagctcgaggcgctgcacccggagctcgtcacgaacgattcaccc
acccaggtggtgggcggggacgtgtcggtggcgtttgccgccgtcgaccacttgagccgc
atgtactcgctggaggacgtgttctccctcgaggaactcgaggcctggctgcgcaaggcc
gaagggtcggtggagaagcagcacggcctggccccgaagtggctcaccgagctgaagatc
gacggcctggccgtgaacctgctctaccgcgacggcgtgctggtgcgggcggccacgcgc
ggcgacggcaccacgggcgaggacatcacgcacaacgtggccaccatcaaggacatcccg
cagcgcctgcatggcagcaacttcccggccgaggtggagatccgcggagaggtgttcatc
gcctcggcggacttcgcggccctgaacgagaaaatggtggccgccggcaaggccccgttc
gccaacccccgcaactcggcggccggctcgctgcgccaaaaggacccggccgagaccgcc
aagcgccccctgagtatgtacgtgcacggcatcggcgcccgcgaggggcttgaaaccacc
agccagtccgagacctacgccctgctgcacgaatggggcatgcccaccagcccgtactac
aaggtcctggacacactcgaagaggtgctcgacttcatcgcccactacggcgagcaccgc
cacgacctcatccacgagatcgacggcatcgtggtcaaggtggacgacttcgccacgcag
cgggccctgggcaacacctcccgcgtgccccgctgggcggtcgcctacaagtacccgccc
gaggaagtccacacgaaactgctggacatcaaggtccaggtgggacgcacgggccgggtg
accccattcggcatcatggaaccggtcaaggtggccggctccaccgtggaacgggccacc
ctccacaaccaggacgtcgtcaaggccaagggcgtgctgatcggcgacatcgtggtgctg
cgcaaggccggcgacgtcatcccggaaatcgtgggccccgtcatggccctgcgcgagggc
cgggaggctgagctgcgcgaattcgtcatgcccgccgaatgcccgtcctgcggcaccaca
ctggcgcccgccaaggagggcgacattgacatccgctgccccaacgccaagtcctgcccc
atccagctgaccgagcgcgtggcgcacctggccggccgcggcggcttcgacatcgaggcg
ctcggctacgaggccgcggcggccctgacctccggtcctggacccgaccctaccgagaac
ggcggcgtcatcgccccggccggacccggaccgctcaccagcgaggctgacgtcttcacc
atcgccgaactggacctgtccgaggtggtggtctggcgcgagatccgcagcaagggtgaa
ggcactggccgcttccaacaggtgccgtacttttacacgaaggccacggccaagaaaccc
tcggtgcccaccaagaccaccgaaaagctttacgaggagctcgaaaaagccaaggcgcag
ccgctctggcgcgtcctcgtcgcactgagtatccggcacgtgggccccacggcgtcgcgg
gccctggccacggcgttcgggtccatggacggtatccgggccgcctcggaagaagcgctg
gccggcgtggacggcgtcggccccatcatcgccgaggccctgattgaatggttcggcgtc
gactggcaccgggacatcgtggacgcctgggcggccgccggcgtgcgcatggccgacgag
gtggacgaatccaccccgcgcaccctggagggcctgacgatcgtggtgaccggcacgctg
ccgaacttcagccgcgacgaggccaaggaggccatcatcacccgcggcggcaaggcctcg
ggctcggtctccaagaacacctcctacgtggtggcgggggagaacgccggcaccaagctg
gacaaggccgaatcgctgggcttgaaggtcctggacgaggaagggttcgtgcgcctgctg
gcggacggcccggccgcggaaacggatattgaaacgatcgacgaaggggagcccgcatga
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