Actinomyces respiraculi: ID810_03640
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Entry
ID810_03640 CDS
T07562
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
arep
Actinomyces respiraculi
Pathway
arep03030
DNA replication
arep03410
Base excision repair
arep03420
Nucleotide excision repair
arep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ID810_03640 (ligA)
03410 Base excision repair
ID810_03640 (ligA)
03420 Nucleotide excision repair
ID810_03640 (ligA)
03430 Mismatch repair
ID810_03640 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arep03032
]
ID810_03640 (ligA)
03400 DNA repair and recombination proteins [BR:
arep03400
]
ID810_03640 (ligA)
Enzymes [BR:
arep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ID810_03640 (ligA)
DNA replication proteins [BR:
arep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ID810_03640 (ligA)
DNA repair and recombination proteins [BR:
arep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ID810_03640 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ID810_03640 (ligA)
MMR (mismatch excision repair)
DNA ligase
ID810_03640 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ID810_03640 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
UPF0758_N
HHH_8
Auto_anti-p27
Zn_ribbon_NUD
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QPL06531
UniProt:
A0A7T0PWK8
LinkDB
All DBs
Position
879535..882093
Genome browser
AA seq
852 aa
AA seq
DB search
MGEDVPVSTQTSRPAPGPAEAPADAAQTTRLTPAEVTETVTLHRRLRHAALRADMVVLRS
QIERARHAYYDAVDTQSPVSDAQYDRWYRALEDLEARYPDLVLAQSPTRTVGGEAATEAF
SPVTHRERMYSLQDVFSLEEVEEWAQRMTADLGVEDAQLTMTAEVKIDGVAVTLTYEHGV
LTRAATRGDGVTGEDVTANVRTIATVPQRLTTTGAPPRVVEVRGEIYLPVEAFTEVNRRR
MEENTAREARNAALQAQPQGSRRKEALLPLFANPRNAAAGSLRQKDPAVTAERPLAFIAH
GVGAIELAEGAPLPDSQHEWYSLLTEWGLPVSPYNALVHGRTEREDYIARYADHRHDLLH
EIDGIVFKVDSRSQQARLGHTSRVPRWASAYKYPPEEVRTRLLDIDVQVGRTGRVTPFGL
MEPVLVSGSTVSRATLHNATEVARKGVLIGDMVVLRKAGEIIPEIVGPVLEERDGTERPF
VMPQHCPSCGTPLAPAKEGDVDLRCPNTRSCPAQVTERIAHIGSRGAFDVEGLGDEAAVA
LTQPDAGREEALAALAAGRVLETERGRVRLDAQALTGLPTAEHLEVARAALVAAGVGEQV
PVLTGEAGLFDLTAEDLRDVFVYQPVRRRGEPTGDWRLARFFWSKETYDKDGAVRKETAP
GKNATAMLAQLDSAKAQPLWRVLVALSVRHVGPTAARALAARFRSLEALREASAEELSEV
DGVGPTIADAWRSWLEVDWHTEILERWAAAGVRTADDAPEEEVPATLSGLTIVVTGTLER
LTRESAKEAIVSRGGKAAGSVSKRTSYVVVGENAGSKEAKALELGVPVLNEEAFERLLAA
GPQALDAQGEVG
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggatgtgcccgtgagcacccagacctcccgcccggcccccggtcccgccgag
gccccggccgacgccgcgcagaccacccgcctgacccccgccgaggtcaccgagaccgtc
acgctgcaccgtcggctccgccacgcggccctgagggcggacatggtggtgctcaggagc
cagatcgagcgcgcccgccacgcctactatgacgccgtcgacacccagtcgcccgtctcc
gacgcgcagtacgaccgctggtaccgcgcgcttgaggatcttgaggccaggtacccggac
ctcgtcctggcccagagccccacccgcacggtgggcggcgaggccgcgacggaggccttc
tccccggtgacccaccgcgagcgcatgtactccctccaggacgtcttcagcctcgaggag
gtcgaggagtgggcccagcgcatgaccgccgacctcggggtcgaggatgcgcaactgacc
atgaccgcagaggtcaagatcgacggcgtcgccgtcaccctcacctacgagcacggcgtc
ctcacccgggccgcgacccgcggtgacggggtcacgggcgaggacgtcaccgccaatgtc
cgcaccatcgccaccgtcccgcagcgcctgaccaccacgggcgcgccaccgcgggtcgtc
gaggtccgcggggagatctacctgccggtcgaggccttcaccgaggtcaaccgtcgacgc
atggaggagaacaccgcccgcgaggcgcgcaacgccgccctccaggcccagccgcagggc
agtcggcgcaaggaggcgttgctgcccctgttcgccaacccccgcaacgccgctgccggc
tccctgcgccagaaggaccccgcggtcaccgccgagcgccccctggccttcatcgctcac
ggcgtgggcgccatcgagctggccgagggcgcccccctgccggactcccagcacgagtgg
tactcgctgctcaccgagtgggggctgccggtgtcgccctacaacgcgcttgtgcacggg
cgcaccgagcgggaggactacatcgcccgctacgccgaccaccgccacgacctgcttcac
gagatcgacggcatcgtcttcaaggtggactcgcgctcgcagcaggcccggctcggccac
acctcccgcgtgccgcgctgggcgagtgcgtacaagtacccgccggaggaggtgcgcacc
cgcctgctcgacattgacgtccaggtcgggcgcaccgggcgggtcactcccttcgggctt
atggagcccgttctggtctccggctcgaccgtctcgcgtgccaccctccacaatgccacc
gaggtcgcccgcaagggcgtgctcatcggtgacatggtcgtcctgcgcaaggccggcgag
atcatccctgagatcgtcggccccgtcctcgaggagcgcgacggtaccgagcgccccttc
gtcatgccgcagcactgcccctcctgtggcacgccgcttgctcccgccaaggagggcgac
gtcgacctgcggtgccccaacacccgctcctgccccgcccaggtgaccgagaggatcgcc
catatcggctcacgcggggccttcgacgtcgagggcctgggcgacgaggccgccgtcgcc
ctcacccagccggatgccggacgcgaggaggcgctggcggctctggcggccggccgtgtc
ctggagaccgagcgcggcagggtccgcctggacgcacaggcgctcacgggcctgcccacc
gccgagcatctggaggtggcccgggcggcactcgtggccgccggtgtgggcgagcaagtg
ccggtgctcacgggcgaggccggcctgttcgacctcacggccgaggacctgcgcgacgtc
ttcgtctaccagccggtcaggcggcgcggtgagccgaccggcgactggcgcctggcccgc
ttcttctggtccaaggagacctacgacaaggacggggcggtgaggaaggagacggccccg
ggcaagaacgccaccgcgatgctcgcccagcttgacagtgccaaggcgcagcctctgtgg
cgggtgctcgtggccctgtccgtgcgtcacgtcggcccgacggcggcgcgtgccctcgcg
gcccgtttcaggtccctggaggccctgcgggaggcgagcgccgaggagctgagcgaggtc
gacggcgtcgggccgaccatcgccgacgcctggcggtcctggctggaggtggactggcac
accgagatccttgagcgctgggccgcggccggggtgcgcaccgccgacgacgcgcccgag
gaggaggttcccgcgacgctgagcgggctgacgatcgtcgtcactggcacgcttgagcgc
ttgacccgcgagagcgcgaaggaggccatcgtctcgcgcgggggcaaggcggcgggcagc
gtctcgaagcgaacgagctacgtcgtcgtcggggagaatgccgggtcgaaggaggccaag
gccctcgagctgggcgtgcccgtgctcaacgaggaggctttcgagcggctgctggccgct
ggaccgcaggcactggacgcgcagggcgaggtcggctag
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